Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo17g00457 | ATGGAGCACTTGTTGGGTCTTCTTAAAATTCATGTTTGCAGAGGGGTTAACCTTGCCGTGAGAGATGTAACGACCAGCGACCCTTATGTTGTTCTCAAAATGGGAAAACAGAAACTGAAAACTCGTGTAGTTAGGAAAAACATCAATCCAGAGTGGAATGAAGATTTAACCATGTCTGTTATGGATCCTTCTCTTCCCATTAAACTCTTTGTGTATGATAAAGATACATTTTCACTTGATGACAAAATGGGAGATGCCGAGTTTGAAATCGGGCCGTTCCTCGATGCCTTGAGAACGCAATTGGACGGCCTCCCAAGCGGAACGATTATAAGAAAGATTCAACCCTGCAGGCAAAACTGCTTGTCTGAAGAGAGTAGTATTGTTTGGGAAGGAGAAAAAGTTGTCCAAAACATGTTTCTCAGATTGAGAAACGTGGAATCTGGTGAAGTTGAATTGAAGTTGCAGTGGGTTGATATTCCTGGCTCGAGAGGCTTATGA | 498 | 41.97 | MEHLLGLLKIHVCRGVNLAVRDVTTSDPYVVLKMGKQKLKTRVVRKNINPEWNEDLTMSVMDPSLPIKLFVYDKDTFSLDDKMGDAEFEIGPFLDALRTQLDGLPSGTIIRKIQPCRQNCLSEESSIVWEGEKVVQNMFLRLRNVESGEVELKLQWVDIPGSRGL | 165 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 6050322 | 6052502 | - | BLOR08003 | Blo17g00457 | 72845 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo17g00457 | 165 | CDD | C2_ArfGAP | 5 | 148 | - | - | |
| Blo17g00457 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Blo17g00457 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 164 | IPR044562 | - | |
| Blo17g00457 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE | 1 | 164 | - | - | |
| Blo17g00457 | 165 | Gene3D | C2 domain | 4 | 160 | IPR035892 | - | |
| Blo17g00457 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 113 | IPR035892 | - | |
| Blo17g00457 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
| Blo17g00457 | 165 | Pfam | C2 domain | 7 | 92 | IPR000008 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g00958 | Blo-Chr1:24547561 | Blo17g00457 | Blo-Chr17:6050322 | 2.07E-41 | dispersed | |
| Blo04g00845 | Blo-Chr4:9218314 | Blo17g00457 | Blo-Chr17:6050322 | 3.02E-83 | dispersed | |
| Blo13g00639 | Blo-Chr13:28948742 | Blo17g00457 | Blo-Chr17:6050322 | 2.86E-37 | dispersed | |
| Blo16g00116 | Blo-Chr16:2719330 | Blo17g00457 | Blo-Chr17:6050322 | 1.76E-82 | dispersed | |
| Blo17g00457 | Blo-Chr17:6050322 | Blo18g00463 | Blo-Chr18:5261428 | 6.93E-18 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo17g00457 | - | - | qsu:112031486 | 278.1 |