Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00458 ATGAAGAGAGAGCATCAGGACGGATCTGGGAAAGGTTATGGCGGAAGAAGGGGATTTGGGAAAGCAGGAGAACAAGAGAGCTCGGTTTTACAGTTCGCGGGAAAAGGTAAGATTTGGGAAGAAGAGCAAGATGCGGGAGGAATGGATGAGCTTCTCGCTGTTTTGGGGTACAAGGTTAGGTCGTCGGACATGGCCGATGTCGCACAGAAGCTCGAACAGCTCGAAATGGTTATGGGTACTGCTCAGGAAGATGGAATTTCTCATCTCTCTTGCGATGCTGTTCATTACAATCCTTCTGATCTTTCTAGCTGGATTCAAAGCATGCTTTCCGAGCTTAATAACCCTACGAATAGTCTCGAATCTCTTCCAAATCCGAACGATGTTCCGGTTCTTGGTCGCTCGGAAGCTCCCTTGGTAGTTAATGGCGGATTCTCGAATTCTCAGCGGCAGTTCGAGAATCAATATAGGGTTTTCGACGATTCGGAGTATGATCTGAGAGCGATACCCGGAGTTGCAGTTTATCCTCAAATCGATTCGCCGAGGAAGCGATTAAGAACATCGTTACTATCAGATTCATCGTCTCCTGCGACTCCCGACGTATCCCGACCGGTGGTTCTCGTTGATTCGCAGGAAACCGGCGTACGTCTCGTCCACACTCTCATGGCCTGTGCAGAAGCAGTTCAAGAAGATAATATGAAACTCGCCGACGCCCTAGTGAAACATATCGGAATTCTGGCGGCCTCGCAGGCCGGCGCCATGCGAAAAGTCGCCACCTACTTCGCTGAAGCTCTCGCTCGCCGGATTTACAGAATCTACCCACAAGATTGTCTAGACCCATCTTATAACGATCTTCTCCAGATGCACTTTTACGAGACCTGCCCTTATCTCAAATTTGCTCATTTCACTGCAAATCAAGCGATTCTTGAAGCTTTCGCGACCGCTAGTAGAGTCCACGTAATAGATTTCGGGCTCAAACAGGGCATGCAGTGGCCTGCTTTGATGCAGGCGCTCGCATTACGTCCCGGAGGGCCACCCACTTTCCGTCTTACAGGAATTGGCCCGCCCCAGCCAGATAACACCGACTCTTTACAGCAAGTGGGTTGCAAATTAGCGCAATTGGCCGACACAATTGGAGTCAAATTTGAATTTCGTGGGTTTCTCTGCAACTCTCTAGCAGATCTGGAGCCGGAAATACTCGACATCCGTCCACCGGAGTTCGAAACCGTGGCAGTGAACTCTGTTTTCGAGTTTCACCGTCTTCTCTCTCGGCCTTCCGCCGTGGAGAAGGTGCTTTCTTCGATCAAGAGTATGAAGCCGAGAATCGTGACGATGGTGGAACAAGAAGCGAATCACAACGGACCAATTTTCATGGACCGGTTTACTGAGGCTCTTCACTATTACTCCAATCTGTTTGACTCGTTGGAAGGGTCAGCTCCGCCGAGTCAGGACCTAGTAATGTCTGAGCTGTATCTGGGAAGACAGATATGCAACGTGGTGGCTTGTGAAGGTCCGGACCGAGTCGAGCGGCACGAGACGATGAGTCAGTGGCAAACTCGGATGGGATCTGCTGGGTTTGACCCAGTTCACCTAGGATCGAACGCGTTCAAGCAAGCGAGTATGTTACTGGATCTGCTTGGCGGAGGGGATGGATACAGGGTAGAGGAAAACAATGGGTGTTTGATGCTTGGATGGCACACGCGGACGTTGATCGCCACCTCGGCCTGGCAACTCGCTACTGGAGGAACTCATTGA 1752 50.68 MKREHQDGSGKGYGGRRGFGKAGEQESSVLQFAGKGKIWEEEQDAGGMDELLAVLGYKVRSSDMADVAQKLEQLEMVMGTAQEDGISHLSCDAVHYNPSDLSSWIQSMLSELNNPTNSLESLPNPNDVPVLGRSEAPLVVNGGFSNSQRQFENQYRVFDDSEYDLRAIPGVAVYPQIDSPRKRLRTSLLSDSSSPATPDVSRPVVLVDSQETGVRLVHTLMACAEAVQEDNMKLADALVKHIGILAASQAGAMRKVATYFAEALARRIYRIYPQDCLDPSYNDLLQMHFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDSLQQVGCKLAQLADTIGVKFEFRGFLCNSLADLEPEILDIRPPEFETVAVNSVFEFHRLLSRPSAVEKVLSSIKSMKPRIVTMVEQEANHNGPIFMDRFTEALHYYSNLFDSLEGSAPPSQDLVMSELYLGRQICNVVACEGPDRVERHETMSQWQTRMGSAGFDPVHLGSNAFKQASMLLDLLGGGDGYRVEENNGCLMLGWHTRTLIATSAWQLATGGTH 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6072350 6074101 - BLOR08004 Blo17g00458 72846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00458 583 PANTHER DELLA PROTEIN RGL1 43 576 IPR030006 GO:0003712|GO:0005634
Blo17g00458 583 Gene3D - 47 112 IPR038088 -
Blo17g00458 583 MobiDBLite consensus disorder prediction 1 26 - -
Blo17g00458 583 Coils Coil 64 84 - -
Blo17g00458 583 ProSiteProfiles GRAS family profile. 207 576 IPR005202 -
Blo17g00458 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 576 IPR005202 -
Blo17g00458 583 Pfam Transcriptional regulator DELLA protein N terminal 49 116 IPR021914 -
Blo17g00458 583 Pfam GRAS domain family 216 576 IPR005202 -
Blo17g00458 583 SMART DELLA_2 49 122 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00753 Blo-Chr1:10017385 Blo17g00458 Blo-Chr17:6072350 0 dispersed
Blo15g00454 Blo-Chr15:6842938 Blo17g00458 Blo-Chr17:6072350 1.98E-74 dispersed
Blo16g00714 Blo-Chr16:27676282 Blo17g00458 Blo-Chr17:6072350 0 dispersed
Blo17g00458 Blo-Chr17:6072350 Blo02g00135 Blo-Chr2:1150119 7.83E-73 dispersed
Blo17g00458 Blo-Chr17:6072350 Blo18g00464 Blo-Chr18:5297705 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13521 PF03514 GRAS 4.80E-134 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00458 K14494 - tcc:18601873 850.121