Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo17g00514 | ATGGATTCGGAGGAGGATGAGTTTGATATGCATGACGCTCACGATGTTGATGACGAAGATTTTTATAGCGGAGGCGAAGACGATGCAGCTGCAGTGGACAGTGAAGATGCTGATTTGGCCGATTACGAGTTCATTGATAACGATTCAGATGATTCTGACGGTGTTATCTCGCATCGGCACCAGCCAAACTTTACCATCTTGAGTGAGGCAGATATACACCAGCGCCAAGAGGATGATATCATGAGAGTATCTACCGTCCTTTCAATTCCCAAGGTTTCAGCTAGCATCCTGCTCCGCTATTATAATTGGAGTGTCAGTAAAGTGCACGATGAATGGTTTGCTGATGAAGAAAAGGTTCGTAGGGCTGTTGGCTTGCTGGCCAAACCAGTTGTTGATTTTTCCAATGCGAAAGTACTAGCTTGTGGCATATGTTTTGAAACCTATCCTTCTGATAGGATTTGTGCTGCTTCTTGTGGTCATCCATTTTGCAATGCGTGTTGGACAGGTTATATTAGTACATCTATTAATGATGGTCCTGGATGTCTGACATTGAGATGTCCTGAACCATCTTGTGTTGCTGTTGTTGGCCAAGATACGATTAATATGTTGGCTTCAGATGAAGATAAACAGAAGTATTCTCGTTACTTTGTAAGATCTTATATTGAAGACAATAGGAAGACCAAATGGTGTCCTGCTCCAGGATGTGATTATGCTGTGGATTTTATTGTTGGAAGTGGAAGCTATGATGTGACGTGCCGCTGCTCTTATAGCTTTTGCTGGAATTGTACAGAAGAAGCTCATCGTCCTGTTGATTGTAGCACAGTGGCCAAATGGATTTTGAAGAACAGTGCTGAATCAGAAAACATGAATTGGATTTTGGCTAATTCAAAACCTTGTCCAAAATGCAAGAGACCTATTGAAAAAAATCAAGGGTGTATGCATATTACTTGTACACCCCCTTGTAAATTTGAGTTTTGCTGGCTTTGCCTTGGTGCATGGTCAGATCACGGTGAGCGAACTGGTGGATTTTATGCGTGTAACCGTTATGAAACGGCGAAGCAGGAGGGTGTGTATGATGAAGCTGAAAAGAGAAGGGAAATGGCGAAGAACTCTCTTGAGAGGTACACTCATTACTATGAAAGATGGGCTACAAACCAATCGTCCAGGCAAAAAGCACTTACAGATCTCCATCAAATGCAAAATCTCGAGAAGCTAAGTGACGTACAGTGCCAGCCTGAATCACAGCTCAAGTTCATCACAGAAGCCTGGCTTCAGATAGTTGAGTGTAGAAGAGTACTCAAGTGGACTTATGCATATGGTTTTTATTTACCCGAGTACGAACATGCAAAGAGACGTTTCTTTGAGTACTTGCAAGGTGAGGCTGAATCAGGGCTGGAACGACTTCATCAGTGTGTGGAAAAAGAACTTCAAGTTTATCTCAATGCAGAAGGCCCGTCGAAAGATTTCAATGAGTTTCGCACGAAGCTTGCTGGACTAACTAGCGTGACTAGGAACTACTTTGAGAATCTGGTCCGAGCACTTGAAAATGGTCTATCAGACGTGAACTCTCACGGTGCTTGCAGCCGTGCAGCCAGCTCGAAGATCATGGATGGCAGCAGTAGCAGGAGTAGAGGCGGGAAGATTGATTGTTCTCAGCCTCAGCCTCACATTGGAGCAGGGCGGTTCTCACTCTTTCTGCTAATGGAAGCTGTGCTATTGCATTCAAATTTATCAATAATGGAAAACACAAATACTAAAAGAGGCTGTGCAACAGTAAGCAATTATGGGAGTCGGAACAGAACTAACGAAGCAAGCTTTAGCGGACAAGATTCTACTATAGGAATCAAGAATGCTTTTTTCTCCCGGAGAAGTTTTCAAATGAGAAGAGTACAATGGAAATTAGCCTTTGCCTTGAACACTAGTGGGATCTCAGGCAACAGGGAGGAAGGAGATAGGGTCGAAAGTGACAACTCTGGTCTTGGACGCACTAGATTAGGAAGAATAGTGAGTGCAGGGGGTAAAGTACTGCTGGAGAAGCTGAATTCGGCTAGAAAAAACTTCCCCATGAAGATATTTTTGCTTCTTTTGGGTTTTTACACGGCAAATGCACTTGCTACGATTCTTGGGCAGACAGGCGATTGGGATGTGTTGGTTGCTGGAGTAGTAGTTGCTGCCATCGAAGGGATTGGGATGCTAATGTACAAAAGGCGTCCTTCTCCATCCTCAAATGGAAGATTACAGTCTTTTGTTGTGATGATGAACTACTGGAAAGCAGGTGTCTGCTTAGGCCTCTTTGTAGATGCATTTAAGTTGGGGAGTTAA | 2322 | 43.58 | MDSEEDEFDMHDAHDVDDEDFYSGGEDDAAAVDSEDADLADYEFIDNDSDDSDGVISHRHQPNFTILSEADIHQRQEDDIMRVSTVLSIPKVSASILLRYYNWSVSKVHDEWFADEEKVRRAVGLLAKPVVDFSNAKVLACGICFETYPSDRICAASCGHPFCNACWTGYISTSINDGPGCLTLRCPEPSCVAVVGQDTINMLASDEDKQKYSRYFVRSYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVTCRCSYSFCWNCTEEAHRPVDCSTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRREMAKNSLERYTHYYERWATNQSSRQKALTDLHQMQNLEKLSDVQCQPESQLKFITEAWLQIVECRRVLKWTYAYGFYLPEYEHAKRRFFEYLQGEAESGLERLHQCVEKELQVYLNAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVNSHGACSRAASSKIMDGSSSRSRGGKIDCSQPQPHIGAGRFSLFLLMEAVLLHSNLSIMENTNTKRGCATVSNYGSRNRTNEASFSGQDSTIGIKNAFFSRRSFQMRRVQWKLAFALNTSGISGNREEGDRVESDNSGLGRTRLGRIVSAGGKVLLEKLNSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKRRPSPSSNGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS | 773 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8162243 | 8175787 | - | BLOR08060 | Blo17g00514 | 72902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo17g00514 | 773 | CDD | RING-HC_RBR_TRIAD1_like | 141 | 191 | - | - | |
Blo17g00514 | 773 | ProSiteProfiles | TRIAD supradomain profile. | 137 | 350 | IPR044066 | - | |
Blo17g00514 | 773 | SUPERFAMILY | RING/U-box | 211 | 279 | - | - | |
Blo17g00514 | 773 | Pfam | Ariadne domain | 359 | 518 | IPR045840 | - | |
Blo17g00514 | 773 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Blo17g00514 | 773 | PANTHER | RBR-TYPE E3 UBIQUITIN TRANSFERASE | 26 | 537 | - | - | |
Blo17g00514 | 773 | SUPERFAMILY | RING/U-box | 291 | 339 | - | - | |
Blo17g00514 | 773 | Coils | Coil | 358 | 378 | - | - | |
Blo17g00514 | 773 | SUPERFAMILY | RING/U-box | 137 | 222 | - | - | |
Blo17g00514 | 773 | Pfam | IBR domain, a half RING-finger domain | 210 | 272 | IPR002867 | - | |
Blo17g00514 | 773 | Pfam | IBR domain, a half RING-finger domain | 289 | 337 | IPR002867 | - | |
Blo17g00514 | 773 | Gene3D | - | 268 | 521 | - | - | |
Blo17g00514 | 773 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 26 | 537 | IPR031127 | GO:0004842|GO:0016567 | |
Blo17g00514 | 773 | SMART | ibrneu5 | 210 | 272 | IPR002867 | - | |
Blo17g00514 | 773 | SMART | ibrneu5 | 276 | 346 | IPR002867 | - | |
Blo17g00514 | 773 | Pfam | Protein of unknown function (DUF565) | 710 | 773 | IPR007572 | - | |
Blo17g00514 | 773 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 135 | 222 | IPR013083 | - | |
Blo17g00514 | 773 | ProSiteProfiles | Zinc finger RING-type profile. | 141 | 187 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo17g00514 | Blo-Chr17:8162243 | Blo04g01135 | Blo-Chr4:18587297 | 9.57E-12 | dispersed | |
Blo01g00201 | Blo-Chr1:2657711 | Blo17g00514 | Blo-Chr17:8162243 | 0 | transposed | |
Blo03g00874 | Blo-Chr3:34559841 | Blo17g00514 | Blo-Chr17:8162243 | 2.49E-13 | transposed | |
Blo15g00712 | Blo-Chr15:23101189 | Blo17g00514 | Blo-Chr17:8162243 | 6.54E-46 | transposed | |
Blo17g00514 | Blo-Chr17:8162243 | Blo18g00504 | Blo-Chr18:6355363 | 1.52E-23 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo17g00514 | K11968 | - | jre:108982156 | 1001.5 |