Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo17g00516 | ATGGGGTCCTGCTTCTCAGCAGAAAGCAAGAGCCCTCGACCTGGTTCGCCCAGGAGTCCTTCCCCAACAGTCAGGAAGAGGAAAAACTCGAAGAATCGAAACTCTTCGTTCGATTATCAGAGGGAAGAATCATTGCATCGTATTCCAGATAGAATGTTCTTAAACGGATCGAGTGAGGTGGCATCCCTATTTACTCAACAGGGTAAGAAGGGGCCCAATCAGGATGCCATGATTTTGTGGGAGAATTTTGCTTCCATGTCGGACACATTGTTTTGTGGAGTTTTCGACGGGCATGGCCCATATGGTCATTTTGTTGCAAAAAAAGTGAGAGATTCTCTTCCCCTGAAACTCAGTGAACTTTTGGAAGATAATCCAACCCATGAGGATGTGCTCAGAGGCATCACTTTAAATACCGAAAACATCAATTCTGAAGACACATCTTCTGTATTGGATGATGGAGAAGCCAGAGTCTCCATTGGCAGCGATGAAGTGAAGAAGCAGACTGAGATTTTTGATTCTCTGAAGGAATCAATCCTCAAGGCTTTTAAAAGTATGGACAGGGAACTGAGAATGCATCCGAGGATTGATTGCTTCTTTAGTGGGACAACGGCTGTAACTCTGCTCAAACAGGATCAAGATCTGATTATTGGAAACGTTGGGGACTCTAGAGCTGTTCTTGGTACAAGAGATATAGATGATTCACTTGTTGCAGTTCAACTGACAGTGGATCTCAAGCCTAACCTTCCAGGGGAAGCAGAGAGAATCAGAAGGTGCAGAGGTCGGATTTTTGCGCTTCGAGAAGAACCTGAGGTTGCTCGAGTATGGCTTCCCAACAACGACTCCCCTGGCCTTGCCATGGCCCGGGCTTTCGGAGATTTCTGCCTCAAGGATTTTGGTCTCATTGCCGTTCCTGACATTTCTTATCGACGCCTCACCGAGAAAGACGAGTTTGTTGTCTTGGCCACTGATGGAATTTGGGACGTTCTTTCGAACGAAGAGGTGGTAGAAATTGTAGCTTCATCTCCTGCTCGTTCAACTGCAGCTCGAGATCTCATTGAATCTGCGATCAAAGCATGGAGAAGTAAATTCCCGACATCCAAGATCGATGATTGTGCCGCTGTCTGTCTCTTTTTGGATTCAAATTCCAAATTTGAAGAAGAGCGAACTTCAATAGACCTTCTCCACCCTGCAATGGAGGATTCGGATCAGACGGAAGAAGAGACTCTAGATTCTTCTGCTCTCGAGGGAGTGGTTCGAGCAGACACAGTGATTAACCTTCCAAGGTTTCCTCCAGGAGAGAAGTAA | 1305 | 46.05 | MGSCFSAESKSPRPGSPRSPSPTVRKRKNSKNRNSSFDYQREESLHRIPDRMFLNGSSEVASLFTQQGKKGPNQDAMILWENFASMSDTLFCGVFDGHGPYGHFVAKKVRDSLPLKLSELLEDNPTHEDVLRGITLNTENINSEDTSSVLDDGEARVSIGSDEVKKQTEIFDSLKESILKAFKSMDRELRMHPRIDCFFSGTTAVTLLKQDQDLIIGNVGDSRAVLGTRDIDDSLVAVQLTVDLKPNLPGEAERIRRCRGRIFALREEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLIAVPDISYRRLTEKDEFVVLATDGIWDVLSNEEVVEIVASSPARSTAARDLIESAIKAWRSKFPTSKIDDCAAVCLFLDSNSKFEEERTSIDLLHPAMEDSDQTEEETLDSSALEGVVRADTVINLPRFPPGEK | 434 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 8221869 | 8224464 | - | BLOR08062 | Blo17g00516 | 72904 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo17g00516 | 434 | SMART | PP2C_4 | 49 | 376 | IPR001932 | - | |
| Blo17g00516 | 434 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 389 | - | - | |
| Blo17g00516 | 434 | Pfam | Protein phosphatase 2C | 163 | 357 | IPR001932 | - | |
| Blo17g00516 | 434 | CDD | PP2Cc | 60 | 378 | IPR001932 | - | |
| Blo17g00516 | 434 | SUPERFAMILY | PP2C-like | 57 | 380 | IPR036457 | - | |
| Blo17g00516 | 434 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
| Blo17g00516 | 434 | ProSiteProfiles | PPM-type phosphatase domain profile. | 60 | 378 | IPR001932 | - | |
| Blo17g00516 | 434 | PANTHER | PROTEIN PHOSPHATASE 2C 33-RELATED | 1 | 389 | - | - | |
| Blo17g00516 | 434 | Gene3D | - | 55 | 380 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo02g00086 | Blo-Chr2:590743 | Blo17g00516 | Blo-Chr17:8221869 | 2.35E-134 | dispersed | |
| Blo10g00255 | Blo-Chr10:3605173 | Blo17g00516 | Blo-Chr17:8221869 | 1.33E-157 | dispersed | |
| Blo15g00550 | Blo-Chr15:10759494 | Blo17g00516 | Blo-Chr17:8221869 | 1.11E-137 | dispersed | |
| Blo17g00295 | Blo-Chr17:3099904 | Blo17g00516 | Blo-Chr17:8221869 | 5.16E-95 | dispersed | |
| Blo07g01110 | Blo-Chr7:31015599 | Blo17g00516 | Blo-Chr17:8221869 | 1.48E-123 | transposed | |
| Blo12g00048 | Blo-Chr12:3373115 | Blo17g00516 | Blo-Chr17:8221869 | 9.16E-157 | transposed | |
| Blo11g00408 | Blo-Chr11:3551070 | Blo17g00516 | Blo-Chr17:8221869 | 0 | wgd | |
| Blo17g00516 | Blo-Chr17:8221869 | Blo18g00505 | Blo-Chr18:6370709 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo17g00516 | - | - | cit:102625738 | 597.816 |