Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00522 ATGGAAGTGGAAGATAGCGACGAAGGCGGCGATATCTTGATTCCTCCGCCGAATTTCTCCATGGTTGAGGATGGAATTTTTAGATCCAGTTTTCCTCATCCTTCCAACTTTTCTTTTATCCGGACGCTGAATCTTCGCTCAGTCTTGTATTTGTGTACAGATCCATATCCAGAAGAAAATATGGAGTTTCTTGGAGCCCAAAATATTCAGCTTTTCCAATTTGGAATAGAAGGGAAAACGGATCCTCCTGTGTCTATTCCGAAGGCTACGATCATGAACGCTTTGAAAGTTCTAATCGATGTTAGGAATCACCCCATCTTGATCCATTGCAAGGCGGGGAAGCATCGAACGGGCTGTCTTGTTGGTTGCCTGCGGAAATTGCAGAACTGGTGTTTGTCCTCTGTGCTGGAGGAGTATGGGCGCTTTGCCGGTGTGAAATCAAGGAAGGCTGATTTGAGATTCATAGAGACATTTGATATTTTCTTACTGAGACAATGCCTTTACAGCATCATATATCAGTATCAAGGATACAGCTCGAAGAAAAGGCGGCTTCTCTACAAAGAAGAGACCGTACAAACATCGTCGAAAATCGCATCAATATAG 603 43.62 MEVEDSDEGGDILIPPPNFSMVEDGIFRSSFPHPSNFSFIRTLNLRSVLYLCTDPYPEENMEFLGAQNIQLFQFGIEGKTDPPVSIPKATIMNALKVLIDVRNHPILIHCKAGKHRTGCLVGCLRKLQNWCLSSVLEEYGRFAGVKSRKADLRFIETFDIFLLRQCLYSIIYQYQGYSSKKRRLLYKEETVQTSSKIASI 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8376526 8378518 - BLOR08068 Blo17g00522 72910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00522 200 PRINTS Plant and fungal dual specificity phosphatase signature 50 63 IPR020428 GO:0016791
Blo17g00522 200 PRINTS Plant and fungal dual specificity phosphatase signature 69 83 IPR020428 GO:0016791
Blo17g00522 200 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Blo17g00522 200 PRINTS Plant and fungal dual specificity phosphatase signature 13 30 IPR020428 GO:0016791
Blo17g00522 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 182 - -
Blo17g00522 200 CDD PFA-DSP_Siw14 13 159 - -
Blo17g00522 200 Gene3D Protein tyrosine phosphatase superfamily 12 161 IPR029021 -
Blo17g00522 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 160 IPR029021 -
Blo17g00522 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 108 118 IPR016130 GO:0016311|GO:0016791
Blo17g00522 200 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 89 121 IPR000387 GO:0016311|GO:0016791
Blo17g00522 200 Pfam Tyrosine phosphatase family 13 161 IPR004861 -
Blo17g00522 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 18 174 IPR020422 GO:0006470|GO:0008138
Blo17g00522 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 10 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00060 Blo-Chr2:402999 Blo17g00522 Blo-Chr17:8376526 2.46E-50 dispersed
Blo04g01214 Blo-Chr4:22899915 Blo17g00522 Blo-Chr17:8376526 1.30E-44 dispersed
Blo17g00522 Blo-Chr17:8376526 Blo13g00337 Blo-Chr13:19362324 2.16E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00522 K18045 - cit:102621872 306.219