Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00570 ATGGATCCAAAGCAGCCGCAGCAGGAAGTGGCACCCAACTTCCTTAGCCTGCCGCAGTGGAGGATGGCTGAGAACAAAGCTGCAGAAATGAAGGATTTCCAGATAGTGGTTGCAGAAAAGGAAGAAGGAAAAAAGCAGTTGGCGCCAAAAAGAAGCTCAAACAAAGACAGACACACAAAAGTGGAAGGAAGAGGAAGAAGAATAAGGATGCCGGCTCTATGTGCGGCGAGAATTTTTCAATTGACGAGGGAATTGGGTCATAAATCGGATGGAGAAACCATACAGTGGCTGTTGCAGCAGGCTGAGCCGTCCATAATGGCGGCAACGGGCACAGGAACGATTCCAGCATCGGCTATGGCGGCGGCGGGTGTGTCTGTTTCCCAGCAGGGTGCTTCTTTATCATCAGGACTGCATCAAAAGATTGATGAACTAGCTGGGTCCAGTATGGGGGCTGGAAGTAGGACCAGTTGGGCCATGGTGGGTGGTAATTTGATGGGGCGACCCCATATGGGCTCCGGTCTTTTGCCCTCAGTGGGGAGTTTTGGATTTCAATCATCGTCTTCTCCAAATTCAACTAATTTGGGAGATAACAGCAGTTCAAATTACCTTCAGAAAATAGGGTTTTCTCAGTTCGATCAATTACCAGCTGCCAATATGAGTTTCAGCTCAATTTTAGGCGGGAACATGAACAACCAGCCATTGCCAGGGCTGGAGCTTGGGTTGTCTCAGGATGGCCATATCGGGATTTTGAATCCTCAAGCTTTAAGCCAGATTTATCAGCAAATTGGACACGCTAGAGTTCTTCAGCAGAATCAGCCTCCTGCCAAAAACCATACGGAAGGGTCGGGACAGTGA 855 48.89 MDPKQPQQEVAPNFLSLPQWRMAENKAAEMKDFQIVVAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIMAATGTGTIPASAMAAAGVSVSQQGASLSSGLHQKIDELAGSSMGAGSRTSWAMVGGNLMGRPHMGSGLLPSVGSFGFQSSSSPNSTNLGDNSSSNYLQKIGFSQFDQLPAANMSFSSILGGNMNNQPLPGLELGLSQDGHIGILNPQALSQIYQQIGHARVLQQNQPPAKNHTEGSGQ 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 10478760 10479614 - BLOR08116 Blo17g00570 72958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00570 284 Pfam TCP family transcription factor 53 142 IPR017887 -
Blo17g00570 284 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 270 IPR005333 GO:0003700
Blo17g00570 284 ProSiteProfiles TCP domain profile. 54 108 IPR017887 -
Blo17g00570 284 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 22 270 - -
Blo17g00570 284 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00611 Blo-Chr11:6109106 Blo17g00570 Blo-Chr17:10478760 7.40E-105 dispersed
Blo12g00477 Blo-Chr12:22409012 Blo17g00570 Blo-Chr17:10478760 1.28E-34 dispersed
Blo13g00013 Blo-Chr13:195089 Blo17g00570 Blo-Chr17:10478760 3.18E-41 dispersed
Blo17g00570 Blo-Chr17:10478760 Blo16g01121 Blo-Chr16:39702350 5.19E-37 dispersed
Blo17g00570 Blo-Chr17:10478760 Blo10g00401 Blo-Chr10:6870883 2.21E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13529 PF03634 TCP 5.00E-31 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00570 - - jre:108984550 412.92