Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00594 ATGATCGCACACGTACTGAACCAGATTATTCTGACTTTGTGGAAGTCGATCCGACCGGAAGATATGGCAGATTATAGAGCATTTGATGAGTACGAAGGGATTGAAGTTGCTTGGAACCAGATCAAACTCTATGATTTTCTGCAATGCCCAGAAGATCTTGAAAGACTGTACAGTGAAATTCATCTTCTAAAAACATTGAAGCACAAAAACATTATGAAACTCTACACTTCCTGGGTCGATACTTCAAGTAGGAACATCAATTTTGTCTCTGAAATGTTCACTTCTGGAACACTAAGACAATACAGGCTGAAGCACAGGAGAGTTAACATTAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAAAGGGCTTGTCTATCTTCATAGCCATGACCCACCCGTGATTCACAGAGATCTCAAGTGTGATAATATTTTTGTAAATGGAAATCAAGGAGAAGTGAAGATTGGTGATCTCGGCCTCGCTGCAATTCGCAGGAAATCACACGAAGATTATTGTGTTGCAGGGACTCCGGAATTTATGGCTCCGGAAGTTTATGAAGAGGCATACAATGAATTAGTTGACATCTATTCATTTGGAATGTGCTTATTGGAGATGGTTACATTTGAGTATCCATATAGTGAATGTACTCATCCTGCTCAGATCTACAAGAAAGTTACTTCTGGGAAAAAACCGGACGCCTTCTACAAAGTGAAGGATCCAGAAGTAAAGCAATTCGTCGAGAAATGTTTGGCGACAGTGTCACTTAGGCCATCTGCAAGGGAGCTCTTGAATGACAGTTTTCTCCGAATCGAGGACTGTGATCATGATTTGAGACCATTGGATCGTGGTTTGAGGGACGAGGGTTGTCTGATAAGACAGCCTTTCCTTGATCTAAGCGGAGGTAAAAGCACTCTTTGTAGTGGAGGATCTGATGATTATAATTATTTTGATGCTTCAAGTAAATGGGGGTATCCTCCTGCTGAGGTCGAACGTTGTGGAATCGAGCTTTTTGAGCATCGGGATGATGGACATTACGAAGAAGTTGACATAAGTATTATCGGCAAGAGGAGAGAAAATAGCGAAATCTTTCTAAGACTCAGAATTTCGGATAAAGATGGCCTGATTCGGAACATTTATTTCCCATTTGATGCCAAGGCCGATACGGCATTAAGTGTAGCGACTGAAATGGTAGCGGAACTTGATATAATGGACCAATATGTGATGAGAATAGCAGATATGATTGATGGGGAAATTGCTTCCATAGTTCCCCAGTGGCAGCCCCGGCCACACATCGAGGATACGATCGATCAAACATTTTGTCATAGTCATGCTTCCAATCGAACATCCTATGGTTCTCTAATGGAGTTTTTGACGATGAACGATTCTGGGAAGGACTTGCAGGTTCTTCAATGTTGCAAAAATGGCTGTTCTTCCACACTCGGAGCAGCTTCCGAGCAACTGATGGCAACGAGGATCATTTGA 1482 42.11 MIAHVLNQIILTLWKSIRPEDMADYRAFDEYEGIEVAWNQIKLYDFLQCPEDLERLYSEIHLLKTLKHKNIMKLYTSWVDTSSRNINFVSEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILKGLVYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIRRKSHEDYCVAGTPEFMAPEVYEEAYNELVDIYSFGMCLLEMVTFEYPYSECTHPAQIYKKVTSGKKPDAFYKVKDPEVKQFVEKCLATVSLRPSARELLNDSFLRIEDCDHDLRPLDRGLRDEGCLIRQPFLDLSGGKSTLCSGGSDDYNYFDASSKWGYPPAEVERCGIELFEHRDDGHYEEVDISIIGKRRENSEIFLRLRISDKDGLIRNIYFPFDAKADTALSVATEMVAELDIMDQYVMRIADMIDGEIASIVPQWQPRPHIEDTIDQTFCHSHASNRTSYGSLMEFLTMNDSGKDLQVLQCCKNGCSSTLGAASEQLMATRII 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 11584084 11586319 + BLOR08140 Blo17g00594 72982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00594 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Blo17g00594 493 Gene3D Transferase(Phosphotransferase) domain 1 93 273 - -
Blo17g00594 493 SMART serkin_6 25 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00594 493 Pfam Protein kinase domain 27 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00594 493 ProSiteProfiles Protein kinase domain profile. 1 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00594 493 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 25 485 - -
Blo17g00594 493 SUPERFAMILY Protein kinase-like (PK-like) 25 269 IPR011009 -
Blo17g00594 493 Gene3D Phosphorylase Kinase; domain 1 22 91 - -
Blo17g00594 493 CDD STKc_WNK 25 268 - -
Blo17g00594 493 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 25 485 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00594 Blo-Chr17:11584084 Blo18g00578 Blo-Chr18:8400628 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84799 PF00069 Pkinase 2.10E-44 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00594 K08867 - tcc:18600244 711.064