Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00599 ATGAAACACATTTTCAAGAAGCTTCACAAAGGAAGCAATCACGAACCCAATCGGACCAACGAGACGCCAATCGCCACATCTTCGTCTTGTGCTACTGATCATGGAACAGTCTCTGTCCAAGCGTCTGGAAATTCTCCGGCAAGTCCTTCGTTTCCGTCTTTTCCCGCTGTTCCTGCTGGTGGCGTGCCCGCCACTCCGCCCTCGGCGGTCTCCAATTTGCCTGATTACATTTCCTCAGAGGAAGAATTTCAGGTTCAGCTTGCCCTAGCGATTAGCGCTTCGAATTCTGACTTCCATGGCGATCCGGAGACGGATCAAATTCGAGCAGCCACACTGCTGAGCTTGGGTAATAATCGTTCTGATTCAGCTACTAAGGTCAAGAACGAAGATGCCGAGGCACTGTCGAGGCAGTATTGGGAATACAATCTGCTTGACTATGAAGAGAAAGTTGTGGACGGCTTTTATGATATATATGGAATCTCCTCAGGTTCCGCTATTCAAGAAAAAATGCCCTCACTTGCTGATTTGGAATTAAGCCCTTGTAGTACTAGCTTTGAAGTCATTGTAGTTAATAGAAAAATTGATCGGGCGCTGGAAGAGCTAGTGCAAATCGCTCAATGTATTGCAGACTTTCCTGGCAACAAGATTGATGTTTTAGTGCAGAGACTAGCCGAACTTGTTAATGAACATATGGGTGGACCTGTGTTGGATGCCACTATAATGTTTGCAAGATGGATGGAGCAAAGCACAGAGTTGAGGACATCTCTCCATACCAGTCTCTTGCCTATTGGGTCTATAAATATTGGCTTGTCAAGACATCGTGCTTTGCTTTTCAAGCAATTGACAACACCATCATTGTCGTTGGGGGGAGTTGATGCAATTTCTTGTTTTGGCCGTTGGCTATATTCTATGACTTGTTGCCGGAGCCTGGTGTTGGCTGACAGTATCAGAATGCCTTGTAGACTTCTAAAAGGTAGTCATTACACGGGATTTGAGGATGATGCAGTAAACATTATAAAGCTGGAGGATGAAAGAGATTATTTGGTTGATCTAATGGCAGCACCAGGAACACTTATTCCAGCTGATATTTTAAGTGCAAAAGATACAGTCCCAAATCCTTACAACTCAAAAATAAGTCAAATTCATCATCGTTGTTCCTCATCTTTCTCAGAATTAGCATCATCACGTGGAAAGGATGACGGTCAAAGTAGTTTAATAATGGTGGATGGAACACTCGATCCTGGAAATATAGGATCGGTGTCTTCATTATCAAATGGTGATAGTTTTGTTTCTTCTTCTGGAATATCAAGCAAAGTAACTCCTAAGCAATCTGATAATATCTCCTCATTAGCCATCGGGAAGTCTCAGGACAAAGGTGGTTTAGCCGTTGGCAGTGGCACTAGGATGAATGTCAATGTAATTCCATACAGCCAAAAGACCCCAGAAGATTCTAATGACCTCTTTGCTGATCTTAATCCATTTAAGATCAAGGGCGGCAAAAATTTCATGCATCATGAAGCATCAGATTATAATGTTGTTGAATCACAAAGACTGAGAAATCCTGGTCGACCCCCTGTGCCATTGATGTGGAAGAACCGACATGCTTGTAATGAAGTCCCTAAGAAAAAAGAGAATGACTTAATGGGTGTTTTTGTTCCACAAAATAGCTATGGTTTAAATCATTATAACATGTCCACATCTGCTGCTTCAAGCTCCAGTGTACCTGTCAAAGTGACTTCGGGAAGTTTCACATCATCACATAATTTAAACATGCCTGTTAAACACACAAACACTACACAGTTTGCATCTAGTGGCGCTGCGGGGTTGGAATCTGTTACTAGTCAGCTTGGCAACATGGCATCAGATGACGAGCAAAGTGGAGAACGTACTTTGAATGAGGAAATTTTACAAAATGATAAAGTTGATATGATTAAAGAACAAGAAGACTGCAGTAAATTCCATGATCGAAAAAAAGGTGCGCCTGACAGGTTTTGGGATCCCAATTTAAAATTTAAGGCCCCAGAGAAACCCAGCTCATCTGGAACTTTCAGCTCAATCAGGGTGGTGAAAGAATTTGATGATGTGGATGTAGGTGAATGCGAAATCACTTGGGAAGACCTGGTTATTGGTGAAAGGATTGGGCTAGTAGGTTCATATGGAGAGGTCTACCGTGCTGATTGGAATGGCACGGAGGTAGCTGTGAAGAAGTTTCTAGATCAAGATTTCTCTGGGGCTGCTTTGGCTGAGTTCAAAAGGGAAGTACTAATAATGCGTCAACTGCGTCATCCAAACGTAGTTCTTTTTGTTGGAGCTGTCACACGTACCCCAAACCTCTCCATCATTACTGAGTTTCTTCCTAGAGGAAGCTTATATCGGATCATCCACCATCCCCATTGCCCAATTGATGAAAGACGAAGAATAAAGATGGCTCTTGATGTGGCGCAGGGCATGAATTGCTTGCATACAAGCAGACCCACCATCGTCCACCGTGATTTGAAGTCGCCAAATCTCCTGGTTGATGAGAACTGGAATGTCAAGTTGTCTTTCTTATTTCATGAATCCAAGTTGCTAGAGTGTGACGTTTATAGCTTTGGAGTCATTTTGTGGGAGCTTGCAACTTTGAGATTGCCCTGGAGTGGGATGAACCCAATGCAAGTTGTAGGGGCAGTAGGCTTTCAGAATCGCCGGCTTGAAATCCCGAAAGAAGTTGACCCTGGGGTTGCCAGAATTATTTGGCAATGTTGGCAGACAGATCCAAATCTGCGCCCCTCATTTGCACAGCTCACCGAGGCTCTAAATCCTCTGCAGCAGCTTGTCATATCATCGCATCTCGACCAGACAAGCGCCCCATTGCTACCAGAGATTTCAGTGAATTCTACACCCTGA 2886 43.66 MKHIFKKLHKGSNHEPNRTNETPIATSSSCATDHGTVSVQASGNSPASPSFPSFPAVPAGGVPATPPSAVSNLPDYISSEEEFQVQLALAISASNSDFHGDPETDQIRAATLLSLGNNRSDSATKVKNEDAEALSRQYWEYNLLDYEEKVVDGFYDIYGISSGSAIQEKMPSLADLELSPCSTSFEVIVVNRKIDRALEELVQIAQCIADFPGNKIDVLVQRLAELVNEHMGGPVLDATIMFARWMEQSTELRTSLHTSLLPIGSINIGLSRHRALLFKQLTTPSLSLGGVDAISCFGRWLYSMTCCRSLVLADSIRMPCRLLKGSHYTGFEDDAVNIIKLEDERDYLVDLMAAPGTLIPADILSAKDTVPNPYNSKISQIHHRCSSSFSELASSRGKDDGQSSLIMVDGTLDPGNIGSVSSLSNGDSFVSSSGISSKVTPKQSDNISSLAIGKSQDKGGLAVGSGTRMNVNVIPYSQKTPEDSNDLFADLNPFKIKGGKNFMHHEASDYNVVESQRLRNPGRPPVPLMWKNRHACNEVPKKKENDLMGVFVPQNSYGLNHYNMSTSAASSSSVPVKVTSGSFTSSHNLNMPVKHTNTTQFASSGAAGLESVTSQLGNMASDDEQSGERTLNEEILQNDKVDMIKEQEDCSKFHDRKKGAPDRFWDPNLKFKAPEKPSSSGTFSSIRVVKEFDDVDVGECEITWEDLVIGERIGLVGSYGEVYRADWNGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNVVLFVGAVTRTPNLSIITEFLPRGSLYRIIHHPHCPIDERRRIKMALDVAQGMNCLHTSRPTIVHRDLKSPNLLVDENWNVKLSFLFHESKLLECDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPGVARIIWQCWQTDPNLRPSFAQLTEALNPLQQLVISSHLDQTSAPLLPEISVNSTP 961
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 11746710 11757421 + BLOR08145 Blo17g00599 72987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00599 961 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 311 847 - -
Blo17g00599 961 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 68 281 - -
Blo17g00599 961 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 858 953 - -
Blo17g00599 961 MobiDBLite consensus disorder prediction 1 52 - -
Blo17g00599 961 Gene3D Transferase(Phosphotransferase) domain 1 786 854 - -
Blo17g00599 961 Pfam Ethylene-responsive protein kinase Le-CTR1 131 282 - -
Blo17g00599 961 Pfam Ethylene-responsive protein kinase Le-CTR1 311 359 - -
Blo17g00599 961 SMART serkin_6 707 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00599 961 Gene3D Phosphorylase Kinase; domain 1 700 785 - -
Blo17g00599 961 ProSiteProfiles Protein kinase domain profile. 708 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00599 961 SUPERFAMILY Protein kinase-like (PK-like) 696 949 IPR011009 -
Blo17g00599 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Blo17g00599 961 Pfam Protein tyrosine and serine/threonine kinase 857 932 IPR001245 GO:0004672|GO:0006468
Blo17g00599 961 Pfam Protein tyrosine and serine/threonine kinase 709 848 IPR001245 GO:0004672|GO:0006468
Blo17g00599 961 PANTHER SERINE-THREONINE PROTEIN KINASE 311 847 - -
Blo17g00599 961 PANTHER SERINE-THREONINE PROTEIN KINASE 68 281 - -
Blo17g00599 961 PANTHER SERINE-THREONINE PROTEIN KINASE 858 953 - -
Blo17g00599 961 CDD STKc_MAP3K-like 709 932 - -
Blo17g00599 961 Gene3D Transferase(Phosphotransferase) domain 1 855 950 - -
Blo17g00599 961 MobiDBLite consensus disorder prediction 17 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00599 Blo-Chr17:11746710 Blo09g00517 Blo-Chr9:16385929 4.09E-24 dispersed
Blo17g00599 Blo-Chr17:11746710 Blo01g01468 Blo-Chr1:53894919 3.06E-151 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84800 PF14381 EDR1 7.90E-48 CL0125 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00599 - - qsu:112030473 1026.93