Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00605 ATGGGGTGTATACATAGCCGAGAAATATCTTCTCAGAATGTTGTAAGATCAGAGGTTAAGAGGGAAATAAGTTCTGCTAATGTATCAAATAGGAAGGTAGATGATGATTTAGAGAAGGTGGTACCAAAAGCAGGTTCTAATGCTGTCGAGGAACTTAATGGTGTGGCTGAGAAAGAGATAAAAGCACACGAGGATCGGTATGTGTCACGGGACAGAAGAAAGTCTAGACTAAAACAAAGGTCGAATGTTAATCTGAAGCAGTCACCAGGGGAGCAGCTGCCTGCAGGATGGCCACCTTGGCTTACAACAGTGTGCGGAGAAGCACTCAATGGTTTGCTCCCACGGAGGGCAGATTCATTTGAAAAAATTGAAAAGATTGGACAGGGAACTTATAGTAATGTATATAAAGCTAAAGATACAATCACAGGTAAAATTGTTGCGCTAAAGAAGGTTAGATTTGACAATATGGAGCCGGAGAGCGTGAAATTTATGGCGAGAGAGATACACATTTTGCGGCAGTTAGATCATCCTAATGTTATAAAGTTGGAGGGAATAGTTACATCAAGGATGGGGTATAGCTTGTATCTGGTGTTTGAGTATATGGATCATGATTTAGCTGGCCTTGCTACAAACCCAGACATTAAATTTACTGAACCCCAGGTCAAGTGTTTTATGCATCAGCTATTATCTGGACTGGAGCATTGTCACAATCATGGTGTGCTTCATCGTGACATCAAAGGGTCTAATCTTCTTATTGATAGTGGAGGAGTACTAAAGATTGCTGATTTTGGCTTGGCTTCTTTCTTTGATCCTAACCACAAACATCCCATGACTAGTCGTGTTGTTACATTATGGTACCGACCACCTGAGCTTCTACTTGGGGCTACTGATTATGGTGTGGGAATTGACCTCTGGAGTGCTGGTTGTATTGTAGCTGAGTTATTAGCCAGGAGGCCCATTCTGCCTGGCCGTAATGAGGAATGGAAATTATTATGCAGCTACTTCCTGTTGAGCTCGCTTAATATTTTTTTTATTGTTCGTATATTCTTTATGACCAAACCCTATGGTTGTGAGCCTTCTAGTTTACCAAAATTCCCTCCTAGTAAGGAGATTGATGCAAAACGACGGGATGATGAAGCTCGGAGATTAAGAGCAGCCATCAAGGCTCAGGGTGATGGCGTGAAGCAAAAACGAACTCGTGGCCGTGCTCCAAGGGCTGTGCCGGCTCCTGAAGCTAATGCCGAATTACAACCAAATATAGATAGAAGGCGTCTATTAACACGGGCAAACGCCAAGAGCAAGAGTGAGAAATTTCCTCCTCCACATCAAGATGGAGAAATTGGCTTTCCATTTGGATATTCGCAGCACAACTGTCCTGCCAATGCTACGAAAGGCAACCCTATTAGCACAACCTCATTTGGCAATTCAAAAAACTCCGATCATGCTTGGTCAGGTCCATTGGTTAACACTTCTAGACCAAATAAGCATGGCGGCGGCAATGCTTGGGAACACTCTAAAGGAAAGAGTTTGGTTTAG 1536 43.03 MGCIHSREISSQNVVRSEVKREISSANVSNRKVDDDLEKVVPKAGSNAVEELNGVAEKEIKAHEDRYVSRDRRKSRLKQRSNVNLKQSPGEQLPAGWPPWLTTVCGEALNGLLPRRADSFEKIEKIGQGTYSNVYKAKDTITGKIVALKKVRFDNMEPESVKFMAREIHILRQLDHPNVIKLEGIVTSRMGYSLYLVFEYMDHDLAGLATNPDIKFTEPQVKCFMHQLLSGLEHCHNHGVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCIVAELLARRPILPGRNEEWKLLCSYFLLSSLNIFFIVRIFFMTKPYGCEPSSLPKFPPSKEIDAKRRDDEARRLRAAIKAQGDGVKQKRTRGRAPRAVPAPEANAELQPNIDRRRLLTRANAKSKSEKFPPPHQDGEIGFPFGYSQHNCPANATKGNPISTTSFGNSKNSDHAWSGPLVNTSRPNKHGGGNAWEHSKGKSLV 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 11901422 11906726 + BLOR08151 Blo17g00605 72993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00605 511 SMART serkin_6 120 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00605 511 PANTHER OS01G0367700 PROTEIN 63 327 - -
Blo17g00605 511 PANTHER OS01G0367700 PROTEIN 349 492 - -
Blo17g00605 511 SUPERFAMILY Protein kinase-like (PK-like) 115 355 IPR011009 -
Blo17g00605 511 MobiDBLite consensus disorder prediction 417 441 - -
Blo17g00605 511 ProSiteProfiles Protein kinase domain profile. 120 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00605 511 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Blo17g00605 511 Gene3D Phosphorylase Kinase; domain 1 110 202 - -
Blo17g00605 511 MobiDBLite consensus disorder prediction 389 511 - -
Blo17g00605 511 PANTHER CELL DIVISION PROTEIN KINASE 63 327 - -
Blo17g00605 511 PANTHER CELL DIVISION PROTEIN KINASE 349 492 - -
Blo17g00605 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Blo17g00605 511 Gene3D Transferase(Phosphotransferase) domain 1 203 389 - -
Blo17g00605 511 Pfam Protein kinase domain 120 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00605 511 MobiDBLite consensus disorder prediction 456 496 - -
Blo17g00605 511 MobiDBLite consensus disorder prediction 69 89 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00502 Blo-Chr10:11085056 Blo17g00605 Blo-Chr17:11901422 2.62E-22 dispersed
Blo17g00605 Blo-Chr17:11901422 Blo06g00980 Blo-Chr6:33101410 3.15E-149 dispersed
Blo17g00605 Blo-Chr17:11901422 Blo02g00578 Blo-Chr2:10643580 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84801 PF00069 Pkinase 1.40E-62 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00605 K08819 - pvy:116114591 607.06