Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00606 ATGACTTCAATATTTAGCTATGCACTATCAAGAGTGCATACACTATACACTTCTGATCATTCCTCTGTGGTGTCCATGAACTTATTTGTGGCGCTGCTTTGTGGTTGTATTGTGATTGGTCATCTTCTTGAAGAGAATCGGTGGATGAATGAATCAATTACGGCCCTTGTGATTATCAGCCAATTCATGGGATTCATGTCTCCAGGAACTATGAAAATAAAAGGTGACTTACGTGGCCATGAAGTAATTATTTTAATTGATAGTGGAGCCACACATAATTTTGTGAGTTTCGATTTAGTTTACAAATTGGATATTGCCACTGATAAAATTAAAAGATACGGAGTCATGACGGGTACGAGATTTACTATTAAAGGTGATGCTGTATGTCGAGACTTATTATCATCGGTACAGGGCATGCAAATAGTTGCTGATTTCTTGCCATTGGAGTTAGGTAGTTCCGATGTAATTTTGGGCATGCGATGGTTGACAACTTTTGGAGATATTCAAACTAATTGGAAACAGCTCAGCATGAAATTTGAATATGACTCACAAAAAAGGGCATTGCTTGGTGATCCGACTTTAAGTAAAACGCAAGTTTCCTTCAAGGCACTACTTAAGGCACTTACCTATGATGGAACGAGTTTGTTAATTGAATTAGGGTCAATTGCAACGCATATCGGTTCTCATATGACAGATAGTTTGGAACTTCAAAATATTCTCAAACAGTTTGCAATGGTTTTCACTTTACCGATTGGTGTTATACAGTTCTTTAAGAAGTTGGATATCGGATCACTGGAGATTGGAGATTATCTAGCAATTGGTGCAATATTTGCTGCAACAGATTCTGTATGCACATTGCAGATTTTGAATCAGGATGAGACTCCTTTACTCTACAGTCTCGTATTTGGAGAGGGTGTAGTAAATGATGCCACATCAGTGGTGCTATTCAACGCAATCCAGAGCTTTGACCTCACCCATATTGATTCCAGGATTGCGTTACAATTTATTGGCAGCTTCTTCTACTTATTTTTTACAAGCACTGTTCTTGGAGTGATTACTGGTTTACTCAGTGCTTTCATCATCAAAAAGCTGTATTTTGGCAGGCATTCTACAGACCGTGAGGTTGCTTTAATGATACTAATGGCATACCTTTCTTATATGATGGCGGAATTGTTCTATTTGAGTGGCATTCTTACGGTGTTCTTTTGCGGAATTGTGATGTCACATTACACCTGGCATAATGTTACTGAAAGTTCACGAATTACCACAAAGCATGCTTTTGCTACCTTGTCTTTTGTAGCTGAGATCTTTATCTTCCTTTACGTTGGCATGGACGCATTGGACATTGAAAAATGGAGATTTGTCAGTAACAGTCCTGGGACATCTGTGGCTGTTAGTTCCGTACTGTTAGGTCTGGTTTTGGTTGGAAGAGCTGCTTTTGTTTTTCCTTTATCCTTTCTGTCCAACTTAGCAAAAAAGTCACCAGCTGAGAAAATTAGCTTTAGGCAACAAGTGATAATATGGTGGGCTGGCCTCATGAGAGGTGCCGTATCAATGGCTCTTGCTTATAATCAGTTCACAAGATCCGGTCACACTCAATTGCGTGGGAACGCAATCATGATCACAAGCACCATTACAGTCGTTCTCTTCAGCACAGTGTTATTTGGGTTGATGACCAAGCCTCTCATAAGGTTCTTGTTGCCTCAACCGAAATGGTCGGCGAGTATGGTTTTGTCCGATCCATCTACTCCCAAATCGTTTATCGTTCCACTTCTTGGAGGCGGTCAAGATTCCGAAGTAGATATTGGGGGCCAAGATATTATCCGGCCAAGCAGTATTCGAGACCTCTTGACCACCCCAACACACACCGTTCATCGCTACTGGCGTAAATTTGACAATGCCTTCATGCGACCAGTGTTTGGCGGACGAGGTTTTGTTCCCTTCGTGCCCGGATCTCCAACCGAGAGGAATGCCAACCAATGGCAGTGA 1989 41.13 MTSIFSYALSRVHTLYTSDHSSVVSMNLFVALLCGCIVIGHLLEENRWMNESITALVIISQFMGFMSPGTMKIKGDLRGHEVIILIDSGATHNFVSFDLVYKLDIATDKIKRYGVMTGTRFTIKGDAVCRDLLSSVQGMQIVADFLPLELGSSDVILGMRWLTTFGDIQTNWKQLSMKFEYDSQKRALLGDPTLSKTQVSFKALLKALTYDGTSLLIELGSIATHIGSHMTDSLELQNILKQFAMVFTLPIGVIQFFKKLDIGSLEIGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLTHIDSRIALQFIGSFFYLFFTSTVLGVITGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSNSPGTSVAVSSVLLGLVLVGRAAFVFPLSFLSNLAKKSPAEKISFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRGNAIMITSTITVVLFSTVLFGLMTKPLIRFLLPQPKWSASMVLSDPSTPKSFIVPLLGGGQDSEVDIGGQDIIRPSSIRDLLTTPTHTVHRYWRKFDNAFMRPVFGGRGFVPFVPGSPTERNANQWQ 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 11984139 12000083 + BLOR08152 Blo17g00606 72994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00606 662 Gene3D Acid Proteases 61 196 IPR021109 -
Blo17g00606 662 PANTHER SODIUM/HYDROGEN EXCHANGER 2 8 60 - -
Blo17g00606 662 PANTHER SODIUM/HYDROGEN EXCHANGER 251 661 IPR018422 GO:0006812|GO:0015299|GO:0016021
Blo17g00606 662 Gene3D - 266 318 - -
Blo17g00606 662 SUPERFAMILY Acid proteases 70 166 IPR021109 -
Blo17g00606 662 Pfam Sodium/hydrogen exchanger family 249 563 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo17g00606 662 PANTHER SODIUM/HYDROGEN EXCHANGER 8 60 IPR018422 GO:0006812|GO:0015299|GO:0016021
Blo17g00606 662 Pfam Retroviral aspartyl protease 82 167 - -
Blo17g00606 662 PANTHER SODIUM/HYDROGEN EXCHANGER 2 251 661 - -
Blo17g00606 662 CDD retropepsin_like 73 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00776 Blo-Chr2:26293124 Blo17g00606 Blo-Chr17:11984139 3.54E-67 dispersed
Blo17g00606 Blo-Chr17:11984139 Blo18g00601 Blo-Chr18:9356710 4.00E-10 dispersed
Blo18g00837 Blo-Chr18:24760235 Blo17g00606 Blo-Chr17:11984139 1.64E-15 dispersed
Blo01g00356 Blo-Chr1:4228157 Blo17g00606 Blo-Chr17:11984139 6.09E-33 transposed
Blo17g00741 Blo-Chr17:22862494 Blo17g00606 Blo-Chr17:11984139 2.49E-27 transposed
Blo17g00606 Blo-Chr17:11984139 Blo18g00584 Blo-Chr18:8744593 8.91E-23 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00606 - - zju:107412105 700.664