Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00623 ATGACTGCAGAGGTGAACGTTGGGGGGTGTCTAAACAAGGGAAGCCAAGGAAGAACACCTCAAAGCAGATTAAAGGGCGTTCAAGTGTTCACATACAGAGAGCTGGAAGCAGCGACGGAGAAATTCAGCGAGAGGAACGTGATTTGGAGAGTAGGAAAGGCAGAGGTGTATAGAGGGGTGTTAGGCGATGGGACAGTGGCCGCCATTAAAGCACTGCATAGGGAAGAAGGGAAGCATAGAGAGCGTACCTTTCGGATCGAGGTGGATCTACTAAGCCGGTTGCACTCTCCATGTCTGGTGGAATTGCTGGGCTACTGCGCGGACCAAAACCACAGGCTTCTAGTATTTGAATTCATGCAAAATGGAACCCTCCAAGGCGGCCTTCATCATCACAAGACTTCATCACAACCATTGGATTGGGGAACACGGTTAAGGATCGCCCTTGATTGCGCCAGGGCACTTGAATTTCTGCATGAACATGCAGTTCCCACGGTGATTCATTGCGATTTCAAGTGCTCTAATATTTTTCTCGATCAAAATTTTCGAGCCAAGGTGTCAGGATTTGGATCGGCCAAAATGGGATCTGATAAGATCAACGGCCAGATGTCGACCAACATGGTCGTGGGCATGGAATATCTTGCACCTGAGTACGCTTCAACAGGAAAACTAACAGCCAAATCAGACGTATACAGCTATGGAGTTGTCCTGTTGGAGCTCTTGACTGGCCGCATGCCTGTTGACATCAACCGCCCTCAAGCCCAACATGTTCTTGTGTCTTGGGCCCTTCCAAGGTTAACAAATAGAGAGAAACTGATGGAAATGGTTGACCCATCTATACAAGGACAGTACTCAAAGAAAGACTTAATTCAGATAGCCGCCATTGCGGCCATGTGTGTGCAGCCTGAAGCAGATTACAGGCCCCTAATGACGGACGTGGTGCAATCACTGATTCCTCTCGTCAAGAACCCGTCTTCGGTGCCTGCTTCAATGGCTTCCTCTGCTTCATCTCGACTCTTGATTCATACACCAAGTCCCAAGTACTAA 1044 48.66 MTAEVNVGGCLNKGSQGRTPQSRLKGVQVFTYRELEAATEKFSERNVIWRVGKAEVYRGVLGDGTVAAIKALHREEGKHRERTFRIEVDLLSRLHSPCLVELLGYCADQNHRLLVFEFMQNGTLQGGLHHHKTSSQPLDWGTRLRIALDCARALEFLHEHAVPTVIHCDFKCSNIFLDQNFRAKVSGFGSAKMGSDKINGQMSTNMVVGMEYLAPEYASTGKLTAKSDVYSYGVVLLELLTGRMPVDINRPQAQHVLVSWALPRLTNREKLMEMVDPSIQGQYSKKDLIQIAAIAAMCVQPEADYRPLMTDVVQSLIPLVKNPSSVPASMASSASSRLLIHTPSPKY 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 13656037 13659948 + BLOR08169 Blo17g00623 73011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00623 347 CDD STKc_IRAK 48 319 - -
Blo17g00623 347 Pfam Protein tyrosine and serine/threonine kinase 55 316 IPR001245 GO:0004672|GO:0006468
Blo17g00623 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Blo17g00623 347 PANTHER OS01G0750732 PROTEIN 8 342 - -
Blo17g00623 347 MobiDBLite consensus disorder prediction 1 20 - -
Blo17g00623 347 ProSiteProfiles Protein kinase domain profile. 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00623 347 Gene3D Phosphorylase Kinase; domain 1 13 118 - -
Blo17g00623 347 SUPERFAMILY Protein kinase-like (PK-like) 19 316 IPR011009 -
Blo17g00623 347 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 8 342 - -
Blo17g00623 347 Gene3D Transferase(Phosphotransferase) domain 1 119 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00623 Blo-Chr17:13656037 Blo07g00596 Blo-Chr7:17677390 1.16E-86 dispersed
Blo05g00152 Blo-Chr5:1392783 Blo17g00623 Blo-Chr17:13656037 6.17E-83 transposed
Blo13g00350 Blo-Chr13:20616616 Blo17g00623 Blo-Chr17:13656037 1.83E-131 transposed
Blo17g00623 Blo-Chr17:13656037 Blo18g00603 Blo-Chr18:9460226 1.57E-126 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84802 PF07714 PK_Tyr_Ser-Thr 3.60E-38 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00623 - - mcha:111004495 496.893