Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00633 ATGGCCTTCTCTCTCTCCTCCATCAAGACCTCTGCAATTTCACTCACCCTTCTCTCCTTCTTCCTCTTCTTCCTCCTCAAAACACCACCTTTATCCACTGATGATCACCCCTCAATTTCACCTCTTTTCCCCAAAAGGTTCCTCATCTCCTCTGCCAACACTTCCTCTTCATCCCCATCCTGTTCTTCCGTCAAATCCCTCTCCGATGGCGGCCTCCTCAACTACTTCTCCCTCCATTTTTGCCTGTTTGAAGAAGACCCATTTCTCTCTATCCCCTTTCTGTCTCTCCTTCTCCTTCTACACTTTTATATTCTCATCACAACCGCACAGGATCATTTCTCTATCGTTACTACCAAGCTTGCTTTTCATCTCAATTTATCTCCGAGTATGGGTGCTGTGACTCTCTTAGCACTAGGAAACGGCGCTCCTGATGTATTTGCTTCGGTTGCTGCAGTCCGCGGTGGTGAATACAGAACTGGCTTTGGTGCAATTCTCTCGGCGGGCACATTTGTATCTGCTTTTGTGGTTGGATTCGTGGCGATTCACGCTGCGCCCTTTGCAGTGAACCCAGCTCCGTTTGTGAGGGATGTATTGTTTTATTTATTTGCAGCCTTGTTCTTGTTTTATGTGTATCTTAGCGCAGAGATCTTTCTATGGCAAGCGATTGGATTTGTTGGATTCTACCTTTTTTTTGTTGCCTTTGTATTTTGGATGGATTTCGGGATGGGTGGTGAAGAATCAAGGAAGGGAATCGAAATTGTGGGGCAGCCAGTTGTTGTGGCACCAGACTGTGAGATCGGTTCTGGTTTGAGAAATCCAGATGAAGAAAAATCAAGTTCTGGATTTTGTCAAGTTTTCACAATGGTAAGCTCTAGAAATTTGTATTTAAGGTTCCTATTAACCTCCATATTCTCTGCTGCAGTCTCATTAATTATCGATTGGAACTTGTCTAAGTTAGCTTACTCAATCTCTAAAGCATGGAGCGTACCAGTTGGATTTGTGTTAAAACTCACAATTCCCCAACCATCGCCATCCGAATGGAGCAGATTCTACTCATCAGCCAACATCGCCCTCTGCCCACTGGCACTGTTATATTCCTGCAACTTATTCGTACCGTTCAGTTATCCCATAATTTTCCTCTTCTCCCACACCCATCTCCCTCTCTGGCTTGTTGTTGTGTGTGGAAGCTCTTCTCTTTCATTTCTTCACTTTGCCATGGAAAAAGAGCCTCCAAAAACAGAGCAAGTAACCGTAATTCTCGTAGCATTTGTTATGAGCGTGTTTTGGATATCCACCATTGCAGGGGAGCTACTCAACTGCCTAGCTACCCTCGGAGCTCTTCTGAAATTACCTCAATCTCTTCTGGGGTTGACTGTTCTTGCATGGGGAAATTCGGTGGGAGACCTCGTTGCTGATGTGGCCCTCGCGAAAGCTGGCCAGCCGTTATTGGCCATGGCTGGATGCTTTGCCGGGCCGATGTTTAACATGCTTGTCGGGCTCGGAACAGCTCTGGTCATGCAAACGGCTGTTTCGTATCCAGAAGCGTATCATCTTGAATTTCATTTGGGAATAGTGATTGCCTTTGTCTTCTTGCTTCTGAGTCTGATGGGTTCTCTCCTGGTAGTTATCTGGTCCAGGTTTCGAGTTCCGAGGTCTTGGGGATTTTGTCTGGTTGGACTTTACGTTGTTTTCATGGCTGTCTGCTTGCTCATCGCCAAGCTTTCTGGGTAA 1731 45.98 MAFSLSSIKTSAISLTLLSFFLFFLLKTPPLSTDDHPSISPLFPKRFLISSANTSSSSPSCSSVKSLSDGGLLNYFSLHFCLFEEDPFLSIPFLSLLLLLHFYILITTAQDHFSIVTTKLAFHLNLSPSMGAVTLLALGNGAPDVFASVAAVRGGEYRTGFGAILSAGTFVSAFVVGFVAIHAAPFAVNPAPFVRDVLFYLFAALFLFYVYLSAEIFLWQAIGFVGFYLFFVAFVFWMDFGMGGEESRKGIEIVGQPVVVAPDCEIGSGLRNPDEEKSSSGFCQVFTMVSSRNLYLRFLLTSIFSAAVSLIIDWNLSKLAYSISKAWSVPVGFVLKLTIPQPSPSEWSRFYSSANIALCPLALLYSCNLFVPFSYPIIFLFSHTHLPLWLVVVCGSSSLSFLHFAMEKEPPKTEQVTVILVAFVMSVFWISTIAGELLNCLATLGALLKLPQSLLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVMQTAVSYPEAYHLEFHLGIVIAFVFLLLSLMGSLLVVIWSRFRVPRSWGFCLVGLYVVFMAVCLLIAKLSG 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 14200023 14202881 + BLOR08179 Blo17g00633 73021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00633 576 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 303 574 - -
Blo17g00633 576 Gene3D - 126 256 IPR044880 -
Blo17g00633 576 Gene3D - 352 570 IPR044880 -
Blo17g00633 576 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 303 574 - -
Blo17g00633 576 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 14 248 - -
Blo17g00633 576 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 14 248 - -
Blo17g00633 576 Pfam Sodium/calcium exchanger protein 420 569 IPR004837 GO:0016021|GO:0055085
Blo17g00633 576 Pfam Sodium/calcium exchanger protein 95 236 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00573 Blo-Chr1:6287063 Blo17g00633 Blo-Chr17:14200023 4.70E-49 dispersed
Blo17g00633 Blo-Chr17:14200023 Blo08g00377 Blo-Chr8:6287293 2.04E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00633 K13754 - csv:101209909 687.182