Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00642 ATGGGCCTTCTTTCTAATAATATCTTCATCATTTTCTTCATCATTTTCACTCCTTTTTCCTTCCAAATCACCGGCATTTTGATTGCCGAAGGACAGTGGATTGCAGGGAAGGACTTCCATGGGCTTCACTTAGAGCAGCTTGATTTCATGGAGGAAAATGGCGGTGGAAATCAAAAGAGCAAGATAAAGAGAGTGGCTGGAGTTGACGAGAGTGAAGTAAAGGAAATTTTGATAGTTGAAAAGTTCAGAGCTTTACTTGGATTCAAGAGCTTGTATTTGAAAAACCCATCAAATGCCGACTCTGCAGAAAGTTTTTCTCCATCTCCTTCTCCACTGTCCGCCATTGAAGCTCCAGCTCCAGCTCCTCTTCCATCCCTTCTTACCCATAATCATTCTCATCCTCCGCTGCATCATTCTCGAGGGGCTAAAAATGGCCACAAAGTACAAACCCAGAATGAAGATCAAGTCAATGTCAGAACTCTGGTTGCAGTTCTTGTCCCTACAGGAGCAGCCATTTTGATTTGTGCTCTTGGGTTCTTCTGGGTCTGCAAGAAATTCAGAAAACAGAGAAAGAAATCCTCAAGAACAATTTCAGTGACTGAAAAAAAAGGAGTCAGAACAGCTGCCTCAAATTGTGTTAATCCTCAGAAATCAGACAAGTACAAGGTAAGCTCAAATCATGGCCTTGATGATCTCTTTTATCTAAATTCACTAGAAATGGATTTGGAGCAACAAAGTTCTTATCCTGTGAAAACCTTCTTAAATCATAACACACCTGAGTTCAACAGCCAAGAAATTTTATATCCAGAAAAATATAATTTGTGTAATTCTTCCTCAAAAGAAATTCAGTCCATTCATGAGGATGAAACAGGATCAATCAAATTCGAATCTGACTGTGCTGATTCTTCGTTTGCCGCTAGAATTCTTTCCGCTGAAATGCATTTGTCGGACGACGAATCATTCCATTCTTTCATCGATTCATATTCATCCATGGCTCGCCTATCAAATGCATCAAAGGCCAGCCATAGTGATGCATCAGAAATTTTAACTGAGAATGTGATAGATGTGTCTCCCAATCAATCAGAAACCACTCAAATTTTGATTTCTCAGCCACCACCACCTCCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCTGGTCTCAGTTGCGAGCTTTTCGGCTTCTCGATCTTCTCCTTATTCAATTAGAACCGGAAATAGAGCTTCATCTTCTTCCACATTGCCATATTTCTCATCACCATTGAAATTGGATTCTTCTTCGGGATCCATTCCAACCCCACGAAAGGATTTGACTTCTTCGATTAAAAAACAAGCTAAACAATCTCCACCATCCCCACCGGCTATTCCTCCACCACCCTGCCCGCCAGGAAATAATTTCTCTATCAAGACTCCACCGCCTCTCCTGTCTCAACTTCCTCATTTTAGACCACTGGGAAAAGATGGATCTCCACTTCCGAAACTCAAGCCACTTCATTGGGACAAAGTCAGAGCTACGCCTGATCGTTCAATGGTGTGGGACAAGCTGAGATCGAGCTCGTTTGAGCTAGATGAGGAAATGATAGAGTCACTTTTCGGATACAATTTACAAAATTCGGCGAAGAATGATGGTACTAAGAGCAAGAGCCCCTCTCCAAGCAAACATATACTTGAGCCGAAGAGACTCCAGAACTTAACCATACTCTTTAAAGCCTTAAATGTGACTGCAGAGCAAGTATGTGAAGCGTTAGAACAAGCAGGGAATGGCTTGAGATTAGCACAAATAGAAGCACTTGTAAAAATGGTACCAACCATGGAAGAAGAGGCAAAGCTATCGAGCTACAAAGGAAACTTCAACGATCTGGGATCTGCAGAGCGATTCGTGATAGTAGTTTTGAGAATTCCGTTCGCCTTTCAGCGGGTCGAAGCCATGCTTTACCGTGAAACTTTTGAGGACGAGGTCGTTCATCTCAGAAACTCATTTTCAATGCTAGAGGATGCTTGCAAGGAACTGAGGTCTAGCAGGCTCTTCTTGAAGTTACTCGAAGCTGTGCTTAAAACGGGAAATCGTATGAACGTTGGAACAATTAGAGGAGGCGCAAAAGCATTCAAACTAGATGCTCTCCTCAAACTGGCTGATGTGAAAGGAACAGACGGTAAAACCACTCTCCTCCATTTTGTGGTTCAAGAAATAATTCGATCTGAAGGAGTTAGAGTTTCCGAGAGCATAATGGGAAAAATCAGCCAGAAAAACAAAAGCAAAACGGCTCAAGAGAGGGAAGAATACTACAGAAAAATGGGTCTAGATCTTGTATCTGGTTTAAGCACAGAACTCTACAATGTGAAGAAAACAGCATCCATTGACATGGATGTTCTCGCTACTTCAGTTTCATATCTCTCAGAAGGAATCGCAAAGCTATTACGTCTGATACACAAGGATTTGTGCGTCGATCAAAGAAGTGAAATTTTCATAAACTCGATGAAATCTTTTATAAATTATGCAGAGAGTATTCTGAAAGAGTTGCAGGAAGATGAAAATAGAGTGCTCTTGAGAGTGAAAGATATTACCGAGTATTTCCATGGCGATTTGAGCAGAGAGGAAGGAAACCCACTTCGAATCTTTGTGATTGTGAGAGATTTTCTGGGTATGTTGGATCATGTCTGTAAAGAGTTGAGAAGTTCGAAAACTGGTCGGAGTCGGAGCCCTCTCGCTCCATTTAGATAG 2721 41.97 MGLLSNNIFIIFFIIFTPFSFQITGILIAEGQWIAGKDFHGLHLEQLDFMEENGGGNQKSKIKRVAGVDESEVKEILIVEKFRALLGFKSLYLKNPSNADSAESFSPSPSPLSAIEAPAPAPLPSLLTHNHSHPPLHHSRGAKNGHKVQTQNEDQVNVRTLVAVLVPTGAAILICALGFFWVCKKFRKQRKKSSRTISVTEKKGVRTAASNCVNPQKSDKYKVSSNHGLDDLFYLNSLEMDLEQQSSYPVKTFLNHNTPEFNSQEILYPEKYNLCNSSSKEIQSIHEDETGSIKFESDCADSSFAARILSAEMHLSDDESFHSFIDSYSSMARLSNASKASHSDASEILTENVIDVSPNQSETTQILISQPPPPPPPPPPPPPPPLVSVASFSASRSSPYSIRTGNRASSSSTLPYFSSPLKLDSSSGSIPTPRKDLTSSIKKQAKQSPPSPPAIPPPPCPPGNNFSIKTPPPLLSQLPHFRPLGKDGSPLPKLKPLHWDKVRATPDRSMVWDKLRSSSFELDEEMIESLFGYNLQNSAKNDGTKSKSPSPSKHILEPKRLQNLTILFKALNVTAEQVCEALEQAGNGLRLAQIEALVKMVPTMEEEAKLSSYKGNFNDLGSAERFVIVVLRIPFAFQRVEAMLYRETFEDEVVHLRNSFSMLEDACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDALLKLADVKGTDGKTTLLHFVVQEIIRSEGVRVSESIMGKISQKNKSKTAQEREEYYRKMGLDLVSGLSTELYNVKKTASIDMDVLATSVSYLSEGIAKLLRLIHKDLCVDQRSEIFINSMKSFINYAESILKELQEDENRVLLRVKDITEYFHGDLSREEGNPLRIFVIVRDFLGMLDHVCKELRSSKTGRSRSPLAPFR 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 14843169 14846157 - BLOR08188 Blo17g00642 73030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00642 906 MobiDBLite consensus disorder prediction 355 495 - -
Blo17g00642 906 Pfam Formin Homology 2 Domain 488 883 IPR015425 -
Blo17g00642 906 Gene3D Formin, FH2 domain 507 900 IPR042201 -
Blo17g00642 906 PANTHER FORMIN-RELATED 52 906 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Blo17g00642 906 MobiDBLite consensus disorder prediction 123 152 - -
Blo17g00642 906 MobiDBLite consensus disorder prediction 449 468 - -
Blo17g00642 906 PANTHER FORMIN-LIKE PROTEIN 52 906 - -
Blo17g00642 906 SMART it6_source 484 898 IPR015425 -
Blo17g00642 906 ProSiteProfiles Formin homology-2 (FH2) domain profile. 484 906 IPR015425 -
Blo17g00642 906 SUPERFAMILY Formin homology 2 domain (FH2 domain) 449 892 - -
Blo17g00642 906 MobiDBLite consensus disorder prediction 368 388 - -
Blo17g00642 906 MobiDBLite consensus disorder prediction 390 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00585 Blo-Chr3:22946758 Blo17g00642 Blo-Chr17:14843169 3.91E-96 dispersed
Blo11g00885 Blo-Chr11:17412692 Blo17g00642 Blo-Chr17:14843169 4.74E-87 dispersed
Blo16g00351 Blo-Chr16:10278143 Blo17g00642 Blo-Chr17:14843169 6.17E-128 dispersed
Blo17g00642 Blo-Chr17:14843169 Blo04g01082 Blo-Chr4:16245411 3.29E-130 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00642 - - qsu:112030660 913.679