Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00653 ATGGCTTACGGGGACGATTCCAAAAAGAGGAAGAGATATGCAATGGTGGGTGTTTCAGGTTTGTTACTCGTCGCCATGGTTGTGGCCGTGACGGTCGGAATTAACTCGAATGGCAGCGATAATAACTCTACCACAAGCAGCGACACCACGGAATTGTCTGCTTCAATGAAATCCATTCAGTCCATTTGCCAACCCACAACCTATAAACAAGAATGTGTTGAGAGTCTCAAATCGTCAAACTCGAGCGATCCGAAGGAACTCATTCAGGTTGGTTTCAAAGCCGCTATGAAATACGTAAATGAGGCTGCGAAGAAATCGGTGACCTTGCAAGAGATCGAGAAAGACCCAAGAGCTGCCAAAGCTCTTGCCGATTGTAAAGAACTCATGGATTTCGCCATCGGCGAGCTCAAGCATTCGTTCAACAAATTAGGTGAATTCGACATCACAAAGCTTGATGAAATGCTCATAGACTTGAGAATTTGGCTTAGTGCTACCATCACGTACCAAGAAACTTGCTTGGATGGATTTGAAAACACAACAAGCAACGCCGGGGAGAAGATGAAATCCGCTTTGAAGACTTCCATGAGGCTAACCAGCAATGGCCTAGCCATGGTCACAGAGATGTCCTCTCTCCTTACGGACTTACAAATTCCTGGGATCAGCCGTAGGCTACTATCGGATGACCTTCCCGTCCTCGGTCATGACGAGTTTCCCGTCTGGTTCAACCCTGGCCTCCGAAAACTCCTCCAAGCTCCGGCTTCAAGCATCAAGGCCGACATTGTCATTGCCAAGGATGGAAGTGGAACATATAAGACCATAAATGAAGCACTAAGTGACATCCCTAAGTACAGCAATAATACCTTTGTGATTTACATCAAGGAAGGTGTTTATGATGAAACTGTTCATTTCAACAAAACCATGACCCATTTGCTCGTCATCGGTGACGGCCCGACCAAAACCCGCATCACCGGAAGCAAAAACTTTATCGACGGCACCCCTACCTTCAAGACTGCAACAGTCGCTGTTCTTGGAGATTACTTCACTGCAAAGGACATTGGAATTGAAAATACTGCAGGGCCTGAAAAACATCAGGCGGTCGCGTTGAGAGTCCAATCCGACTTCTCAGTCTTCTACAACTGCGCAATGGATGGTTACCAAGACACTCTATATGCTCACGCAAAGCGACAGTTCTATCGCGATTGCGAGGTCTCTGGTACCATTGACTTCGTTTTCGGCGATGCTGCTGCCGTCTTCCAAAACTGCACGTTCTTAGTCAGGAAGCCATTGGAGAACCAGCAAACAATCGTGACCGCCCAAGGAAGAAAGGATAGAAGACAACCATCAGCACTGATCCTCCAGAAGTGCAAAATCACCTCCGCGCAAGAGTATTTCCCTGTGAGAAAGCAATTCAGAGCGTTCCTTGGTCGGCCATGGAAGGAGTACTCAAGGACAATAATCATGGAATCATACATTGATGATTTGATTCAGCCAGAAGGTTGGCTCCCATGGATGGGAGATTTCGGTCTCAGAACCTGCTTCTACACCGAATTCAACAACAACGGCCCTGGTTCGGACAAATCGCAGAGAGTGAAGTGGCGGGGAATCAAGACGGTCAATGCAGCACATGCAGCGAAATTCACCGCCGGGAGTTTTTTCAAAGGCGATAGCTGGATCAAGGCGAGTGGAGTGCCTTACAATGCTGGCATGTTTACCTCTGCTTAA 1722 47.5 MAYGDDSKKRKRYAMVGVSGLLLVAMVVAVTVGINSNGSDNNSTTSSDTTELSASMKSIQSICQPTTYKQECVESLKSSNSSDPKELIQVGFKAAMKYVNEAAKKSVTLQEIEKDPRAAKALADCKELMDFAIGELKHSFNKLGEFDITKLDEMLIDLRIWLSATITYQETCLDGFENTTSNAGEKMKSALKTSMRLTSNGLAMVTEMSSLLTDLQIPGISRRLLSDDLPVLGHDEFPVWFNPGLRKLLQAPASSIKADIVIAKDGSGTYKTINEALSDIPKYSNNTFVIYIKEGVYDETVHFNKTMTHLLVIGDGPTKTRITGSKNFIDGTPTFKTATVAVLGDYFTAKDIGIENTAGPEKHQAVALRVQSDFSVFYNCAMDGYQDTLYAHAKRQFYRDCEVSGTIDFVFGDAAAVFQNCTFLVRKPLENQQTIVTAQGRKDRRQPSALILQKCKITSAQEYFPVRKQFRAFLGRPWKEYSRTIIMESYIDDLIQPEGWLPWMGDFGLRTCFYTEFNNNGPGSDKSQRVKWRGIKTVNAAHAAKFTAGSFFKGDSWIKASGVPYNAGMFTSA 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 15444902 15446730 - BLOR08199 Blo17g00653 73041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00653 573 PANTHER PECTINESTERASE 15 569 - -
Blo17g00653 573 CDD PMEI-like_3 61 210 - -
Blo17g00653 573 Pfam Pectinesterase 259 555 IPR000070 GO:0030599|GO:0042545
Blo17g00653 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 209 IPR035513 -
Blo17g00653 573 Gene3D - 253 569 IPR012334 -
Blo17g00653 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 209 IPR035513 -
Blo17g00653 573 SUPERFAMILY Pectin lyase-like 256 567 IPR011050 -
Blo17g00653 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 48 207 IPR006501 GO:0004857
Blo17g00653 573 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Blo17g00653 573 PANTHER PECTINESTERASE 15 569 - -
Blo17g00653 573 SMART PMEI_2 54 204 IPR006501 GO:0004857
Blo17g00653 573 Pfam Plant invertase/pectin methylesterase inhibitor 58 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00788 Blo-Chr1:11485666 Blo17g00653 Blo-Chr17:15444902 2.76E-167 dispersed
Blo10g00373 Blo-Chr10:6186853 Blo17g00653 Blo-Chr17:15444902 0 dispersed
Blo10g00374 Blo-Chr10:6201868 Blo17g00653 Blo-Chr17:15444902 0 dispersed
Blo11g00207 Blo-Chr11:1679936 Blo17g00653 Blo-Chr17:15444902 2.04E-149 dispersed
Blo16g00865 Blo-Chr16:36177127 Blo17g00653 Blo-Chr17:15444902 0 dispersed
Blo01g00064 Blo-Chr1:789868 Blo17g00653 Blo-Chr17:15444902 0 transposed
Blo17g00653 Blo-Chr17:15444902 Blo18g00629 Blo-Chr18:10397379 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00653 K01051 - csv:101207393 801.586