Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00654 ATGCGGTCCACACATCCAAACGCAATCTTTGGTGCTGCTCTAAGAATAACGCTTAATGAAGCAAAACGAGCCATCGAAACAATATCTAGGTTCAGTACACTTTCCTTTAGTTTTCGCGAGCAAATGGCAATAGGGGATTGCAAAGAGCTTCTCGATTTCTCGGTCTCAGAACTGGCTTTGTCATTAGTCGAGATAAAATCAATACGATCGGGCAAAAGAAACATCCATGAAGAAGGGAACTTGAAAGCTTGGCTAAGTGCAGCTCTAAGCAACCAAGACACATGCCTTGAAGGTTTTGAAGGAACAAATATGCAAGTTGAAAGGTTCATTAGAGGAAGCCTAAAAGTTGTCACACAACTAATAGCAAATGTGTTAGCCTTGTACACCCAGCTTTATAGTTTTCCTTACCGACCCCCACAAAACCACACCCACCCAACAAATTCAGATTTTCCAAAATGGCCAATATCGGATTCTGATCAAACAAAATTACTTGAAACGAATCCTGGAAGTATGGCCGTCAATGTAGTTGTGTCATCAGACGGGACTGGAAATTACAGTACGATTACAGAAGCCGTTAATATGGCACCGAATTATAGTAAAAGAAGGTTTATTATATATGTGAAAAAGGGTGTTTATAGGGAGAATATTGATGCGAAGAGGAAGAAAACTAACATCATGTTTGTAGGAGATGGAATAGGACAAACTATTGTGACAGGAAATAGAAATTTCATGCAGGGGTGGACTACGTTCAGAACTGCAACAGTTGCGGTTTCTGGGAAGGGATTCATAGCAAGAGACATGACATTTCGGAACACAGCGGGCCCGGAAAACTTCCAAGCGGTGGCGCTGAGAGTAGACTCCGACCAATCAGCGTTCTTCCGATGTAGCATCGAAGGCCACCAAGACTCGCTCTACATCCACTCTCTCCGCCAATTCTACCGCGAGTGCTCCATCTCGGGCACCATCGACTACATCTTTGGCAACGGCGCTGCCGTTCTCCAAAACTGCAAAATCTTCACGGGAGTCCCTCTTCCACTTCAGAAAGTTACGATCACAGCTCAGGGTCGGAAAAACCCCCATCAGAGCACCGGCTTCACGATCCAAAACAGCTTCATCTACGCCTCCCAGCCGACGTACCTGGGTCGGCCATGGAAGCCGTACTCGAGAGCTGTGTTTCTCAACACCTACATGAATGAGTTGGTTCAGCCTAGGGGGTGGCTCGAATGGTGGGGGGACTTTGCGCTGGGGACCCTCTGGTATGGGGAGTACAAGAACTATGGGGCCGGAGCAGAGCTGTCCGGGAGGGTGAAATGGCCGGGTTATCATGTGATTAGGAACCCTTCGCTAGCTTCTTTCTTCACTCCTGGGAGGTTCATTGATGGACGTTCATGGCTGCCTGCAACTGGAGTTAGGTTTCGTGATGGTCTGAGTGCTTAA 1437 46.9 MRSTHPNAIFGAALRITLNEAKRAIETISRFSTLSFSFREQMAIGDCKELLDFSVSELALSLVEIKSIRSGKRNIHEEGNLKAWLSAALSNQDTCLEGFEGTNMQVERFIRGSLKVVTQLIANVLALYTQLYSFPYRPPQNHTHPTNSDFPKWPISDSDQTKLLETNPGSMAVNVVVSSDGTGNYSTITEAVNMAPNYSKRRFIIYVKKGVYRENIDAKRKKTNIMFVGDGIGQTIVTGNRNFMQGWTTFRTATVAVSGKGFIARDMTFRNTAGPENFQAVALRVDSDQSAFFRCSIEGHQDSLYIHSLRQFYRECSISGTIDYIFGNGAAVLQNCKIFTGVPLPLQKVTITAQGRKNPHQSTGFTIQNSFIYASQPTYLGRPWKPYSRAVFLNTYMNELVQPRGWLEWWGDFALGTLWYGEYKNYGAGAELSGRVKWPGYHVIRNPSLASFFTPGRFIDGRSWLPATGVRFRDGLSA 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 15447297 15449068 - BLOR08200 Blo17g00654 73042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00654 478 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 132 IPR035513 -
Blo17g00654 478 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 7 475 - -
Blo17g00654 478 ProSitePatterns Pectinesterase signature 1. 199 218 IPR018040 -
Blo17g00654 478 Pfam Pectinesterase 174 461 IPR000070 GO:0030599|GO:0042545
Blo17g00654 478 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 7 133 IPR035513 -
Blo17g00654 478 Pfam Plant invertase/pectin methylesterase inhibitor 8 127 IPR006501 GO:0004857
Blo17g00654 478 CDD PMEI-like_3 3 127 - -
Blo17g00654 478 ProSitePatterns Pectinesterase signature 2. 318 327 IPR033131 -
Blo17g00654 478 SUPERFAMILY Pectin lyase-like 171 473 IPR011050 -
Blo17g00654 478 SMART PMEI_2 4 127 IPR006501 GO:0004857
Blo17g00654 478 PANTHER PECTINESTERASE 7 475 - -
Blo17g00654 478 Gene3D - 169 476 IPR012334 -
Blo17g00654 478 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 131 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00382 Blo-Chr8:6423579 Blo17g00654 Blo-Chr17:15447297 6.73E-52 dispersed
Blo17g00654 Blo-Chr17:15447297 Blo07g00810 Blo-Chr7:25995500 4.70E-134 dispersed
Blo17g00654 Blo-Chr17:15447297 Blo09g00029 Blo-Chr9:358877 1.32E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00654 K01051 - tcc:18600505 748.429