Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00661 ATGTCAAGAATAGTCTCGGGAACTGTGAAGCCCATAAATGTGTCTTGCGAGCTTCCTCTACTGTCTCTATCTTTGGACTTGCAGCACCCACATATACTGGACTCTAAGCCTCCACCTTCACAGGCGTGCATAAATAAGAATTTGGCAATTGATGAAATGTTGCTTCTGGTCTGTTCTCCTCTGCTGATTATCTTCTTCCGGACCTTATTCTGCATCGTCGAATCTCAATCTTGGCATAGACTGTTGCCTCTTGTGAAAATGGCTCAGAGTGGCGACAATTGTTATGAGAATGCTTCTCTTTTTTTTTTGGAGGTTATTGGAGTTGATAACACATTTAGGAGGAAATTCGATCGAGAGGAGTATTTAGAACGTGCTCGCGAGCGCGAAAAGCAGGAGTCTGAAGGACGGTCTAAATCCAAATCAAAAGGTCCACCAGTTCAGAGGAAACCTTTGAAACACAGGGATTATGAAGTAGACCTTCAATCGCGCCTGGGGAAAACTCAGGTTGTTACTCCAGTAGCGCCTCTAAGTCAACAGGCAGGATACTATTGTTCAGTTTGTGAATGCGTTGTCAAGGATTCAGCAAACTACTTGGACCATATCAATGGAAAGAAACATCAAAGAGCACTGGGTATGTCTATGCGAGTAGAAAGAGCATCTCTTCAGCAGGTACAAGAGCGGTTTGAAAATCTTAAGAAGAGAAAAACACCTGGCAGCTTTACAGAGCAAGATCTTGATGAAAGGATCTTAAAACAACAGCAAGAAGAGGAGGAAAGGAAGCGACAGCGTAGAGAAAGGAAGAAAGAAAAGAAGAAGGAGAAGGCTGCAGAGGATGAAACTGAAGTAGATCCTGATGTTGCTGCCATGATGGGATTTGGAGGTTTCAGTTCATCTAAAAAGTGA 903 43.19 MSRIVSGTVKPINVSCELPLLSLSLDLQHPHILDSKPPPSQACINKNLAIDEMLLLVCSPLLIIFFRTLFCIVESQSWHRLLPLVKMAQSGDNCYENASLFFLEVIGVDNTFRRKFDREEYLERAREREKQESEGRSKSKSKGPPVQRKPLKHRDYEVDLQSRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQERFENLKKRKTPGSFTEQDLDERILKQQQEEEERKRQRRERKKEKKKEKAAEDETEVDPDVAAMMGFGGFSSSKK 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 16443378 16449522 + BLOR08207 Blo17g00661 73049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00661 300 SMART ZnF_U1_5 179 213 IPR003604 GO:0003676|GO:0008270
Blo17g00661 300 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 107 300 IPR040107 GO:0000398|GO:0005681
Blo17g00661 300 Coils Coil 214 234 - -
Blo17g00661 300 MobiDBLite consensus disorder prediction 125 152 - -
Blo17g00661 300 SUPERFAMILY beta-beta-alpha zinc fingers 178 219 IPR036236 -
Blo17g00661 300 Coils Coil 247 281 - -
Blo17g00661 300 MobiDBLite consensus disorder prediction 125 141 - -
Blo17g00661 300 MobiDBLite consensus disorder prediction 233 300 - -
Blo17g00661 300 Gene3D Classic Zinc Finger 177 214 - -
Blo17g00661 300 MobiDBLite consensus disorder prediction 233 263 - -
Blo17g00661 300 Pfam Zinc-finger of C2H2 type 182 206 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00661 K12848 - tcc:18600556 291.582