Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00662 ATGGCTTCTGCTGCTACGCCCCAGAATTTACTCTCTCTAATTGTGCTTTCTTTCTTCGCCATTACCTCCGCCAAAGTTTTCTTCGAAGAGCGATTCGACGATGGATGGGAGAGTCGGTGGGTTAAATCTGATTGGAAGAAAGAGGATGGTACTGCTGGAGAGTGGAACTACACATCTGGAAAATGGCATGGAGACCCTAACGATAAAGGTATCCAAACAAGTGAGGACTACAGATTCTATTCAATTTCAGCTGAGTTCCCCAAATTCAGCAACAAGGATAATACTCTTGTCTTTCAATTTTCTGTAAAACATGAGCAGAAGCTTGATTGTGGTGGTGGATACATGAAGTTACTCAGTGGTGAAGTTGACCAGAAGAAATTTGGCGGTGACACCCCATACAGCATTATGTTTGGGCCAGATATCTGTGGCTATAGCACGAAGAAAGTCCATGCTATTCTTACTTACAAGGACTCAAACAAATTGATCAAGAAGGAAGTTCCTTGTGAGACAGACCAGCTCAGTCATGTGTACACATTCATCATCCGTCCTGATGCTACATATTCCATCCTCATTGATAATGTGGAGAAACAATCAGGTAGTCTTTACACTGACTGGGACCTTCTACCTGCAAAGAAAATTAAGGATCCCGAGGCCAAGAAACCTGAAGATTGGGATGAAAAGGAATATATTCCTGATCCTGAAGATACTAAGCCAGAGGGTTATGATGGCATACCTAAAGAAATCCCGGATACAGATGCCAAAAAGCCTGAAGACTGGGACGATGAAGAGGATGGTGAATGGACACCACCAACCATAGCCAATCCAGAGTATAAGGGTGAATGGAAGCCAAAGAAAATTAAGAACCCGAACTACAAGGGAAAATGGAAGGCACCAATGATTGACAACCCAGATTTTAAGGATGATCCTGAACTCTACGTTTACCCGGCATTGAAATATGTTGGCATAGAATTGTGGCAGGTCAAATCTGGCACCCTGTTTGACAATGTCTTGATTACTGATGATCCCGAGTATGCAAAGAAGTTTGCCGACGAGACATGGGCCAAACACAAGGATGCCGAAAAAACTGCTTTTGACGTGGCAGAGAAAAAGAGAGAACAGGAGGAGGAAGCTAAGGATGATCTCGTTGATTCTGATGTTGAGGATGAAGATGACGTTGGTGCAGACAACTCAGGTGATGACTCTGATACAGAAACTAAACCAGAAATTGAAGAAACCACAGACGCAAGTGAAGAAGACAAACATGACAGGGAAGAAGACAATTTTGCTATTGTTTTTGCAGCTATGGGTGTGCACATGGAAACTCCACAGCTTTTCAAACGAGATTTTGAAGAAAATGGATCAATGGAGAGAGTGACCCTTTTTCTGAATCTGCTTAAATATCTCCATTCGTCAATCCTGAATTGTGTATTCTTGCATGCACTCAGGCTAATGACCCTACAATTGAGCGTATTTGTATTGCTCTTACTACCGCCGAGTATTGAATGTGGAAAACATATTCTTGTCATCTTGACTGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTGTCTGCTGCTCGGGAGGAAGTACCTGGAAGGCGTGGATATCCTGGTTATATGTACACTGATCTTCCTGAGAACAGACAGACGAAATCGTTCGTCCGTCATCCCCGCCACTGCCAAAATCAGTGTTTCAAATGCCCGCCATTGTTGCAAAGTCAATTTCCATACTGTCAGATGCAGGGCGGCATGGCAATGTTCAGTCTTGGTACAAACACGAGAGAAAATGACGAACAGATTAAGGAGCTGGCGATGAAGGATTTGCACGGGCTAGAGTTGTGGTTGGCTTTGTAA 1854 43.42 MASAATPQNLLSLIVLSFFAITSAKVFFEERFDDGWESRWVKSDWKKEDGTAGEWNYTSGKWHGDPNDKGIQTSEDYRFYSISAEFPKFSNKDNTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYKDSNKLIKKEVPCETDQLSHVYTFIIRPDATYSILIDNVEKQSGSLYTDWDLLPAKKIKDPEAKKPEDWDEKEYIPDPEDTKPEGYDGIPKEIPDTDAKKPEDWDDEEDGEWTPPTIANPEYKGEWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVYPALKYVGIELWQVKSGTLFDNVLITDDPEYAKKFADETWAKHKDAEKTAFDVAEKKREQEEEAKDDLVDSDVEDEDDVGADNSGDDSDTETKPEIEETTDASEEDKHDREEDNFAIVFAAMGVHMETPQLFKRDFEENGSMERVTLFLNLLKYLHSSILNCVFLHALRLMTLQLSVFVLLLLPPSIECGKHILVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLPENRQTKSFVRHPRHCQNQCFKCPPLLQSQFPYCQMQGGMAMFSLGTNTRENDEQIKELAMKDLHGLELWLAL 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 16454512 16464822 - BLOR08208 Blo17g00662 73050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00662 617 MobiDBLite consensus disorder prediction 217 280 - -
Blo17g00662 617 MobiDBLite consensus disorder prediction 399 423 - -
Blo17g00662 617 Pfam Calreticulin family 28 263 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 Pfam Calreticulin family 265 338 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 Gene3D Calreticulin/calnexin, P domain 210 311 IPR009033 GO:0005509|GO:0005515
Blo17g00662 617 MobiDBLite consensus disorder prediction 217 255 - -
Blo17g00662 617 MobiDBLite consensus disorder prediction 365 423 - -
Blo17g00662 617 ProSitePatterns Calreticulin family repeated motif signature. 248 260 IPR018124 GO:0005509
Blo17g00662 617 ProSitePatterns Calreticulin family signature 1. 103 118 IPR018124 GO:0005509
Blo17g00662 617 Gene3D - 499 548 - -
Blo17g00662 617 PRINTS Calreticulin signature 220 233 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 PRINTS Calreticulin signature 286 305 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 PRINTS Calreticulin signature 131 147 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 PRINTS Calreticulin signature 248 270 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 PRINTS Calreticulin signature 105 123 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 PRINTS Calreticulin signature 319 339 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 222 IPR013320 -
Blo17g00662 617 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 502 546 IPR000194 GO:0005524
Blo17g00662 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 546 IPR027417 -
Blo17g00662 617 PANTHER CALRETICULIN AND CALNEXIN 9 419 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Blo17g00662 617 SUPERFAMILY P-domain of calnexin/calreticulin 206 321 IPR009033 GO:0005509|GO:0005515
Blo17g00662 617 Gene3D - 25 380 - -
Blo17g00662 617 Gene3D - 408 478 IPR027417 -
Blo17g00662 617 ProSitePatterns Calreticulin family signature 2. 135 143 IPR018124 GO:0005509
Blo17g00662 617 Coils Coil 364 384 - -
Blo17g00662 617 PANTHER CALRETICULIN-2 9 419 - -
Blo17g00662 617 MobiDBLite consensus disorder prediction 378 398 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00496 Blo-Chr13:26200860 Blo17g00662 Blo-Chr17:16454512 8.33E-45 dispersed
Blo16g00692 Blo-Chr16:26660089 Blo17g00662 Blo-Chr17:16454512 3.07E-60 dispersed
Blo17g00662 Blo-Chr17:16454512 Blo18g00693 Blo-Chr18:15216982 0 dispersed
Blo17g00662 Blo-Chr17:16454512 Blo10g00261 Blo-Chr10:3680213 2.23E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00662 K08057 - jre:108987726 708.753