Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00668 ATGAGCCAGATTGAAACATCTATGACAAGGGCTCCTCTGGTTCCTCTCGCGACTCTAATAGGTCGTGAGCTTAGGAAAGAAAAGGCTGAGAAACCTTTTGTAAAGTTTGGACAGGCAGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTAATAAAACCCGATTGCCAGCGGATTCCTGGCAACCTGTCATCATCTTTTTCTGTCTTTGCGATTTTTGATGGGCACAATGGAATATCAGCCGCTATCTTTACAAAAGAACATTTATTGGGAAATGTGTTGAGTGCGATTCCTCAAGGGGTGAATCGAGAAGAGTGGCTTCAAGCCCTTCCACGGGCTTTGGTTGCAGGTTTTGTAAAAACGGATATTGAGTTTCAGCAGAAAGGTGAGACTTCTGGGACTACTGTCACATTTGTTGTGGTTGATGGATGGACTATTACTGTTGCATCTGTTGGAGATTCTCGGTGCATATTGGACACACAGGGAGGTGTGGTTTCTCTGCTGACTGTAGATCACAGGCTAGAGGAGAATGAAGAGGAGAGGGAGCGTGTGACTGCCAGTGGGGGCGAGGTAGGAAGGCTCAATGTTTTTGGGGGAAATGAGGTTGGGCCTCTCCGCTGCTGGCCAGGTGGACTATGTCTTTCTAGGTCTATTGGTGACACAGATGTGGGAGAATTTATTGTTCCCATTCCGCATGTTAAGCAAGTGAAGCTTTCAACTGCTGGAGGACGACTGATTATAGCTTCTGACGGAATCTGGGATGCATTATCGTCTGATATGGCTGCCAAATCTTGTCGTGGTTTACCCGCTGAGCTTGCTGCTAAGTTGGTCGTGAAGGACGCTCTGCGATCGAGGGGTCTGAAAGATGACACCACATGTTTAGTTGTCGATATAATCCCATCAGAGCAACCCGTGCTGCCATCAACTCCAAGTAAGAAACAAAACATGATAACTTCACTTATTTTTGGGAAGAAATCTCCGAACTTTTCAAGCAAAGCTGGGAATAAGCTCTCTGCTGTCGGAGCGGTTGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTGCTGAAAGGCTGGGTAAGGATATACCTTTGGATCCAAATTCCGGGATCTTTAAATGTGCAGTATGCCAAGTGAATCAATCCCCAAACGAAAATTTATCTATGAATTCTGGCCCTTTCTTCTCAACATCATCAAAGCCATGGGAGGGCCCCTTCCTCTGCACAAACTGTGGAAAAAAGAAAGATGCAATGGAAGGAAAAAGGTCGTGCAAGCCCACGATAATGTCC 1284 45.87 MSQIETSMTRAPLVPLATLIGRELRKEKAEKPFVKFGQAALAKKGEDYFLIKPDCQRIPGNLSSSFSVFAIFDGHNGISAAIFTKEHLLGNVLSAIPQGVNREEWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSTAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKDALRSRGLKDDTTCLVVDIIPSEQPVLPSTPSKKQNMITSLIFGKKSPNFSSKAGNKLSAVGAVEELFEEGSAMLAERLGKDIPLDPNSGIFKCAVCQVNQSPNENLSMNSGPFFSTSSKPWEGPFLCTNCGKKKDAMEGKRSCKPTIMS 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 17077808 17079810 - BLOR08214 Blo17g00668 73056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00668 428 CDD PP2Cc 43 297 IPR001932 -
Blo17g00668 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Blo17g00668 428 Pfam Protein phosphatase 2C 61 266 IPR001932 -
Blo17g00668 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Blo17g00668 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 427 - -
Blo17g00668 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
Blo17g00668 428 Coils Coil 427 428 - -
Blo17g00668 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Blo17g00668 428 Gene3D - 38 302 IPR036457 -
Blo17g00668 428 SMART PP2C_4 23 295 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00378 Blo-Chr10:6280001 Blo17g00668 Blo-Chr17:17077808 0 dispersed
Blo11g00948 Blo-Chr11:20441760 Blo17g00668 Blo-Chr17:17077808 0 dispersed
Blo12g00953 Blo-Chr12:27661508 Blo17g00668 Blo-Chr17:17077808 4.45E-168 dispersed
Blo17g00668 Blo-Chr17:17077808 Blo01g01427 Blo-Chr1:53080047 4.96E-24 dispersed
Blo17g00668 Blo-Chr17:17077808 Blo18g00635 Blo-Chr18:10858196 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00668 - - csv:101219622 752.666