Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00727 ATGGCGGACGAAACGTCCGAGGCTTTGGTTTATCTTCATGGCGACCTCCATTTGAAAATCATCGAGGCTCGAAGCTTGCCTAACATGGACTTGCTCTCTGAGCGTCTTCGTCGATTTTTTTCGACATTCAACACGTGTGTTGCTCCATTTTCTAAAAAGACTGAACACCATCACCACCACAAAATCATCACCAGCGATCCTTACGTTACCGTCTGCCTTGCAGGAGCTACAGTTGCTCGCACTCGAGTGATTGCAAATTCACAGAATCCTGTTTGGAATGAGAGCTTCAATATTCCTCTGGCTCACCCGGTCTCGCTTGTCGAGTTCCATGTGAAAGACAACGACATGTTTGGCGCGGAGATGATCGGTACAGCCACAGTCTCTGTGCAGAGAATCATTTCCGGTGAATCTATAAATGACTGGTTTCCAATAATAAACGCATTCGGGAAACCACCGAAGCCAGATTCAGCCGTTCGTCTGGAAATGACATTCACCAAATGCAACGATAATCCAATCTACAGACACGGAATCGCAACCGATCCGCTTCATTTTGGGGTTCGTAATTGCTATTTTCCTGTACGGCCAGGAGGTTCTGTGACGCTTTATCAGGATGCTCACATTCCGGATTCAGCTTTGGGGAAGATTGAATTGGATAGTAAGACTCTGTTTCAGCACGAGAACTGTTGGGAGGATATTTGCCATGCAATTTTGGAGGCTCATCATTTAGTCTACATTGTTGGTTGGTCGATTTATCATAAAGTGAAGCTAGTGAGAGAGCCTACGAAACCGTTGCCCAGCGGTGGGAATTTGAACTTGGGAGATTTGCTCAAGTATAAGTCCCAAGAAGGAGTGCGGGTTTTGTTGTTGGTTTGGGATGATAAGACTTCGCATAACAAATTTTTCATCAATACGGCTGGAGTCATGCAAACTCATGATGAAGAGACTCGGAAGTTTTTCAAACACTCCTCTGTCACATGTGTGCTGTCACCCCGATATGCCAGCAGTAAACTCAGCATTTTTAAGCAACAGGCACGCTTTATACCATTGACCAGTAATGCTGCATTCTATTTCCTTTCAAAAAATGATCAATGCTTTTATTTTTATAAAACTTCTTTATGTTTATCACTTATATTTCAGGTTGTGGGAACCCTCTTTTCACATCACCAGAAATGTGTGATTGTTGATACACAAGCATCTGGAAATAATCGGAAAATAACTGCTTTCCTCGGAGGTCTTGATCTTTGTGATGGTCGCTATGATACTCCTGAGCATAGACTATTTCGTGATCTTGGTACTGTGTTTCAGAATGATTATCATAATCCGACATTACCCGGTGCACCCAATGGTCCCAGGCAGCCTTGGCATGATTTACACTGCAAAATTGAAGGCCCTGCTGCATATGATGTGCTTACAAATTTTGAGCAACGATGGAGAAAAGCCACAAAATGGTCAGAAATAGGACAGCGTTTCAAAAGGGTGACTCACTGGCACGAGGATGCTTTAATAAAGTTGGAACGTATTTCATGGATACTAAGTCCTTCCTCATCGGTTCCAAATGATGATCCATTACTGTGGGTTTCCAGTGAAGATGATCCTGAAAATTGGCATGTTCAGGTTTTTCGTTCGATAGACTCAGGATCCTTGAAAGGATTTCCTAAAGATGTTTATCAAGCTGAAATTAAGAATCTAGTCTGTGCAAAAAATTTGGTCATAGACAAGAGCATTCAAACAGCATACATTCAAGCAATAAGATCTGCTCAACACTTCATATACATTGAAAACCAGTATTTCCTTGGATCATCATACGCATGGCCTTCTTACAAAAACGCAGGTGCCGATAATCTGATTCCCATGGAGTTGGCATTAAAGATTACCAGTAAGATTAAAGCCAACGAAAGATTCACTGTTTATGTGGTTATACCAATGTGGCCCGAGGGTCTTCCATCTTCCGCTTCCGTACAAGAAATTCTCTATTGGCAGGGACAGACAATGCAAATGATGTATAATATCATCGCACGACAACTTAAATCCATGAAGATAGAGAACTCACATCCACAAGAATACCTGAATTTTTACTGTCTTGGCAATAGAGAAGCAGTGCCCCAGGAGTTGTCTGGCTCAATTAATGCCTCAGATTCAGAGAGGTTTCGAAGGTTTATGATCTATGTGCATGCCAAGGGAATGATTGTTGATGATGAGTATGTCATCTTAGGGTCTGCCAATATAAATCAGCGATCAATGGCTGGCTCAAGAGACACGGAGATAGCCATGGGCGCATATCAACCTCATCACACATGGGGTAAGAAGAAGCGACATCCACATGGGCAGGTTTATGGGTACAGAATGTCCTTGTGGGCAGAACATATGGGGATGATTGATGATCACTTCAAGGAACCTGAAAGTTTGGCTTGTGTCAGGAGTGTAAACAAGATAGCTGAAGATAACTGGAGCAAGTACACTGCAAGGGAATTCATGCCATTACAGGGACACCTTCTCAAATACCCGCTCGATGTGGATGTGAATGGCAAAGTACGGCCACTGGCCGGACAAGAATCCTTCCCTGATGTCGGTGGTAAGGTGCTCGGAACCCATACTACCCTCCCTGATGCTCTAACAACATGA 2622 43.29 MADETSEALVYLHGDLHLKIIEARSLPNMDLLSERLRRFFSTFNTCVAPFSKKTEHHHHHKIITSDPYVTVCLAGATVARTRVIANSQNPVWNESFNIPLAHPVSLVEFHVKDNDMFGAEMIGTATVSVQRIISGESINDWFPIINAFGKPPKPDSAVRLEMTFTKCNDNPIYRHGIATDPLHFGVRNCYFPVRPGGSVTLYQDAHIPDSALGKIELDSKTLFQHENCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTKPLPSGGNLNLGDLLKYKSQEGVRVLLLVWDDKTSHNKFFINTAGVMQTHDEETRKFFKHSSVTCVLSPRYASSKLSIFKQQARFIPLTSNAAFYFLSKNDQCFYFYKTSLCLSLIFQVVGTLFSHHQKCVIVDTQASGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLGTVFQNDYHNPTLPGAPNGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSEIGQRFKRVTHWHEDALIKLERISWILSPSSSVPNDDPLLWVSSEDDPENWHVQVFRSIDSGSLKGFPKDVYQAEIKNLVCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKITSKIKANERFTVYVVIPMWPEGLPSSASVQEILYWQGQTMQMMYNIIARQLKSMKIENSHPQEYLNFYCLGNREAVPQELSGSINASDSERFRRFMIYVHAKGMIVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWGKKKRHPHGQVYGYRMSLWAEHMGMIDDHFKEPESLACVRSVNKIAEDNWSKYTAREFMPLQGHLLKYPLDVDVNGKVRPLAGQESFPDVGGKVLGTHTTLPDALTT 873
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 22093559 22098013 + BLOR08273 Blo17g00727 73115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00727 873 PANTHER PHOSPHOLIPASE D 8 344 IPR015679 -
Blo17g00727 873 PANTHER PHOSPHOLIPASE D 374 872 IPR015679 -
Blo17g00727 873 SMART C2_3c 15 141 IPR000008 -
Blo17g00727 873 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 719 746 IPR001736 GO:0003824
Blo17g00727 873 SUPERFAMILY Phospholipase D/nuclease 220 487 - -
Blo17g00727 873 SUPERFAMILY Phospholipase D/nuclease 572 802 - -
Blo17g00727 873 Gene3D Endonuclease Chain A 551 765 - -
Blo17g00727 873 Pfam Phospholipase D Active site motif 384 418 IPR001736 GO:0003824
Blo17g00727 873 Pfam Phospholipase D C terminal 793 863 IPR024632 -
Blo17g00727 873 Gene3D C2 domain 12 174 IPR035892 -
Blo17g00727 873 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 383 418 IPR001736 GO:0003824
Blo17g00727 873 PANTHER PHOSPHOLIPASE D 8 344 - -
Blo17g00727 873 PANTHER PHOSPHOLIPASE D 374 872 - -
Blo17g00727 873 Pfam PLD-like domain 580 755 IPR025202 -
Blo17g00727 873 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 167 IPR035892 -
Blo17g00727 873 SMART pld_4 383 418 IPR001736 GO:0003824
Blo17g00727 873 SMART pld_4 719 746 IPR001736 GO:0003824
Blo17g00727 873 Pfam C2 domain 14 144 IPR000008 -
Blo17g00727 873 Gene3D Endonuclease Chain A 213 501 - -
Blo17g00727 873 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Blo17g00727 873 PIRSF PLD_plant 1 873 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Blo17g00727 873 CDD C2_plant_PLD 8 165 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00697 Blo-Chr5:23737921 Blo17g00727 Blo-Chr17:22093559 0 dispersed
Blo05g00698 Blo-Chr5:23774484 Blo17g00727 Blo-Chr17:22093559 0 dispersed
Blo17g00727 Blo-Chr17:22093559 Blo18g00026 Blo-Chr18:198175 0 dispersed
Blo17g00727 Blo-Chr17:22093559 Blo05g00130 Blo-Chr5:1211203 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00727 K01115 - jre:108981014 1432.54