Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00729 ATGGGACTGGTTCGGTTCGGTCCAGTTCGGGTAGAAACGGTACCGAACCAATGGTCGGTACTGGGGGTGGTGGGACGGTGCCAGTACTGGGGGTACCGAGTACCGAACCGCAGAAGTCGATACTGGTCCCAACAGTACCGACTGCGGTTCGGTACCCAAATTAAAGGTACCAGACCGCTTCTGTTCTTCATCTCTTTTCCCCACCACAAATCCATGGCTCAAACAACCCCCAACCACACACAAACTGTCTCCGGCTGGGCCGCCTTCGATGCCTCCGGCGAGATCACCCCTTACATTTTCAAAAGAAGGGAAAATGGGAAAAACGATGTTACAATAAAGGTCCTATATTGTGGGATATGTCACACTGATCTCCACCAAGCAAGAAACGACTGGGGAATCACCATGTATCCCATAGTTCCTGGGCATGAGATCACTGGGGTGATAACGAAGGTGGGACAAAACGTGAAGAGGTTCAACGTAGGAGATAACGTAGGAGTTGGGTGTATAGCAGCGTCGTGTTTGGATTGCGAGTTCTGCAATGAATCCAAAGAGAATTACTGCGAAAAGCTTCAGTTCACCTACAATGGCGTCTTTTGGGATGGTAGCGTCACCTACGGCGGATACTCAAAAATGATAGTGGCAGATCAGAGGTATGTGGTGCGTATACCATCGGGCCTGAGAATGGATGCGGCGGCCCCATTGCTGTGCGCAGGAATAACAGTGTTCAGCCCCATGAAAGAGCACAAACTGTTTGAATCGACGGGGAAGAAGATAGGGGTGATTGGGCTTGGAGGGCTGGGACACGTGGCAGTGAAATTTGGGAAGGCTTTTGGCCACCATGTGACTGTGATAAGCACCTCTCCTTCCAAAGAAAAAGAGGCGAAGGAACATCTTGGTGCTGACAATTTTATCGTCAGCACTAATCCTCAGCAAATGCAGGAGGGGACAAGAAGCTTGGACTTTCTATTTGACACAGTGGCTGCAAAGCATTCAATAGGCCCAATCTTGGAGCTGCTCAAAGTGAACGGAACGTTAGTGTTGCTAGGCGCTCCGGAAGAGCCCCTGGAACTGCCGTCCTTCCCACTCATATTTGGAAAGAGAACAGTGAAAGGCAGCGTGATCGGAGGGATGAATGAGACGCAGGAGATGATGGATTTGTGCGGTAAACTCGACATTACGTGCGATGTAGAGGTGATCAAACCAGACCACATCAACCAGGCTTTCGACCGTCTTGCTAAGAACGACGTGCGCTACCGCTTTGTCATCGATATTGCTGACGCTGCCGCCTCTGCTGCAACAATCTCTTCCAGGCTTTGA 1317 50.57 MGLVRFGPVRVETVPNQWSVLGVVGRCQYWGYRVPNRRSRYWSQQYRLRFGTQIKGTRPLLFFISFPHHKSMAQTTPNHTQTVSGWAAFDASGEITPYIFKRRENGKNDVTIKVLYCGICHTDLHQARNDWGITMYPIVPGHEITGVITKVGQNVKRFNVGDNVGVGCIAASCLDCEFCNESKENYCEKLQFTYNGVFWDGSVTYGGYSKMIVADQRYVVRIPSGLRMDAAAPLLCAGITVFSPMKEHKLFESTGKKIGVIGLGGLGHVAVKFGKAFGHHVTVISTSPSKEKEAKEHLGADNFIVSTNPQQMQEGTRSLDFLFDTVAAKHSIGPILELLKVNGTLVLLGAPEEPLELPSFPLIFGKRTVKGSVIGGMNETQEMMDLCGKLDITCDVEVIKPDHINQAFDRLAKNDVRYRFVIDIADAAASAATISSRL 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 22228439 22232313 + BLOR08275 Blo17g00729 73117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00729 438 SMART PKS_ER_names_mod 93 422 IPR020843 GO:0016491
Blo17g00729 438 Gene3D - 237 394 - -
Blo17g00729 438 CDD CAD1 85 421 - -
Blo17g00729 438 Pfam Alcohol dehydrogenase GroES-like domain 108 221 IPR013154 -
Blo17g00729 438 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 72 427 - -
Blo17g00729 438 Pfam Zinc-binding dehydrogenase 265 386 IPR013149 -
Blo17g00729 438 PANTHER ALDEHYDE REDUCTASE 72 427 - -
Blo17g00729 438 SUPERFAMILY GroES-like 91 248 IPR011032 -
Blo17g00729 438 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 227 389 IPR036291 -
Blo17g00729 438 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 141 155 IPR002328 GO:0008270|GO:0016491
Blo17g00729 438 Gene3D - 86 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00786 Blo-Chr3:32718302 Blo17g00729 Blo-Chr17:22228439 1.73E-51 dispersed
Blo04g01119 Blo-Chr4:17892029 Blo17g00729 Blo-Chr17:22228439 5.35E-135 dispersed
Blo16g00317 Blo-Chr16:8094171 Blo17g00729 Blo-Chr17:22228439 3.02E-133 dispersed
Blo16g00516 Blo-Chr16:21032742 Blo17g00729 Blo-Chr17:22228439 1.02E-72 dispersed
Blo17g00729 Blo-Chr17:22228439 Blo06g00176 Blo-Chr6:7265888 5.03E-21 dispersed
Blo18g00224 Blo-Chr18:2198768 Blo17g00729 Blo-Chr17:22228439 1.57E-10 dispersed
Blo17g00729 Blo-Chr17:22228439 Blo04g00973 Blo-Chr4:12183123 1.48E-146 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00729 K00083 - vvi:100262607 591.652