Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00731 ATGGCAAACAAGCTTTTTGCACTAGCCATTTTGCTCAGAGTTTCCTGCATTTTCAACCATGTTTCTGCATTAATACCTTCGGGTTGGACTAAAGCTCACGCTACCTTCTACGGCGGAAGTGACGCGTCCGGAACGATGGGGGGAGCTTGTGGATATGGAAACTTGTATTCAACGGGGTATGGAATAAGAACAGCTGCGTTGAGCACTGCATTGTTCAACGATGGAGCTTCGTGTGGACAGTGCTTTAAAATTGTATGTGATTATAATACAGACCCCAAATGGTGCAAGAAAGGAGCCTCTGTTACTGTCACTGCAACTAACTTCTGCCCTCCAAATTACGCCCTTCCGAACAACAATGGCGGCTGGTGCAATCCTCCCCTCCAGCACTTCGACATGGCCCAGCCTTCTTGGGAGGAAATAGGCATTTACAGAGGAGGCATTATTCCTGTTTTGTACCAAAGGGTCCCTTGTACAAGGAGCGGCGGAGTTAGGTTCACCATCAATGGACACGATTACTTCGAACTCGTTTTGATTAGCAACGTGGGGGGTGCGGGATCCATCATGTCAGTGAGGATTAAAGGGTCGAAAACAAATTGGCAAGTGTTGTCAAGAAACTGGGGAGCTAATTGGCAGTCTAATTCCTACTTAAATGAACAATCTCTATCTTTCCAAGTAACAACTTCAGATGGAATTACCAAACTTTTCATGAACATTGTCCCTGCAAATTGGGAATTCGGACAAACCTTCACCAGCAGTCTACAATTCTAA 768 45.57 MANKLFALAILLRVSCIFNHVSALIPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGIRTAALSTALFNDGASCGQCFKIVCDYNTDPKWCKKGASVTVTATNFCPPNYALPNNNGGWCNPPLQHFDMAQPSWEEIGIYRGGIIPVLYQRVPCTRSGGVRFTINGHDYFELVLISNVGGAGSIMSVRIKGSKTNWQVLSRNWGANWQSNSYLNEQSLSFQVTTSDGITKLFMNIVPANWEFGQTFTSSLQF 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 22268891 22270037 - BLOR08277 Blo17g00731 73119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00731 255 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Blo17g00731 255 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Blo17g00731 255 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Blo17g00731 255 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Blo17g00731 255 PRINTS Expansin signature 137 150 IPR002963 GO:0009664
Blo17g00731 255 PRINTS Expansin signature 173 194 IPR002963 GO:0009664
Blo17g00731 255 PRINTS Expansin signature 161 173 IPR002963 GO:0009664
Blo17g00731 255 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Blo17g00731 255 PRINTS Expansin signature 120 137 IPR002963 GO:0009664
Blo17g00731 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 162 IPR007112 -
Blo17g00731 255 Gene3D - 18 158 IPR036908 -
Blo17g00731 255 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Blo17g00731 255 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Blo17g00731 255 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Blo17g00731 255 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Blo17g00731 255 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Blo17g00731 255 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Blo17g00731 255 PANTHER EXPANSIN 8 255 - -
Blo17g00731 255 SMART dpbb_1 64 152 IPR007112 -
Blo17g00731 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 172 251 IPR007117 -
Blo17g00731 255 SUPERFAMILY PHL pollen allergen 159 251 IPR036749 -
Blo17g00731 255 Gene3D - 162 255 IPR036749 -
Blo17g00731 255 PANTHER EXPANSIN-A15 8 255 IPR002963 GO:0009664
Blo17g00731 255 Pfam Lytic transglycolase 64 152 IPR009009 -
Blo17g00731 255 SUPERFAMILY Barwin-like endoglucanases 28 180 IPR036908 -
Blo17g00731 255 Pfam Expansin C-terminal domain 163 240 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00731 Blo-Chr17:22268891 Blo13g00819 Blo-Chr13:30934850 5.05E-119 dispersed
Blo16g01112 Blo-Chr16:39592483 Blo17g00731 Blo-Chr17:22268891 2.51E-111 wgd
Blo17g00731 Blo-Chr17:22268891 Blo06g00911 Blo-Chr6:32384409 4.67E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00731 - - rcu:8267825 446.047