Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo17g00753 | ATGGGAGCTGCGTACGGAACGGCGAAAAGTGGGGTTGGGGTGGCATCGATGGGTGTGATGAGGCCCGAGCTGGTGATGAAATCGATTGTGCCTGTTGTTATGGCCGGAGTTTTGGGGATCTACGGTCTGATTATTGCTGTGATTATTAGCACAGGGATTAACCCCAAGGCCAAATCCTATTACCTTTTTGATGGCTATGCCCATCTGTCCTCTGGTCTTGCTTGTGGCCTCGCTGGTCTCTCTGCAGGCATGGCAATTGGAATTGTCGGAGATGCCGGTGTTAGGTATCATATCTTACTTTTTGTGAGGTTTCTTTTCCCTAATTTGAGAGCCAATGCGCAGCAACCAAAGCTGTTTGTTGGGATGATTCTCATTCTCATCTTCGCTGAAGCACTTGCCCTGTATGGCCTCATTGTTGGCATTATTCTCTCTTCACGAGCAGTAGTAACTCTTGTCAATGGTGTTGAGGCTTGTTTCATTTTCCTGGTTTTGGGCTTGGTCTACCATAGCATTCCCCAGACTACTACAGCGGTCTACTGCAACGAAGATCCGGGCGACAACAACAATGCTTCTCAAATAAGCATTCACGACTGGGCCACCGCAACTCAACTCCAAGCTGCCGCAGAAGACTTGTTTTAG | 639 | 48.51 | MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRYHILLFVRFLFPNLRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAVVTLVNGVEACFIFLVLGLVYHSIPQTTTAVYCNEDPGDNNNASQISIHDWATATQLQAAAEDLF | 212 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 23845470 | 23847889 | + | BLOR08299 | Blo17g00753 | 73141 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo17g00753 | 212 | TIGRFAM | V_ATP_synt_C: V-type ATPase, C subunit | 1 | 94 | IPR011555 | GO:0033179|GO:0046961|GO:1902600 | |
Blo17g00753 | 212 | Pfam | ATP synthase subunit C | 70 | 143 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Blo17g00753 | 212 | Pfam | ATP synthase subunit C | 1 | 49 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Blo17g00753 | 212 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 1 | 147 | - | - | |
Blo17g00753 | 212 | CDD | ATP-synt_Vo_c_ATP6C_rpt2 | 62 | 144 | - | - | |
Blo17g00753 | 212 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT C2 | 1 | 147 | - | - | |
Blo17g00753 | 212 | SUPERFAMILY | F1F0 ATP synthase subunit C | 60 | 144 | IPR035921 | - | |
Blo17g00753 | 212 | CDD | ATP-synt_Vo_c_ATP6C_rpt1 | 1 | 53 | - | - | |
Blo17g00753 | 212 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 80 | 106 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Blo17g00753 | 212 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 3 | 27 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Blo17g00753 | 212 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 29 | 53 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Blo17g00753 | 212 | Gene3D | - | 1 | 150 | IPR035921 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo17g00753 | Blo18g00785 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo02g00650 | Blo-Chr2:15808163 | Blo17g00753 | Blo-Chr17:23845470 | 8.61E-83 | dispersed | |
Blo15g00664 | Blo-Chr15:19363022 | Blo17g00753 | Blo-Chr17:23845470 | 1.89E-59 | dispersed | |
Blo17g00753 | Blo-Chr17:23845470 | Blo18g00785 | Blo-Chr18:22701057 | 3.50E-83 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo17g00753 | K02155 | - | psom:113349779 | 219.55 |