Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00762 ATGGCTAGTTTTTTCTATCTAGGCGATAGAGACCAAGATCCACGAAACAAGGAAAGCGAAGGAGAAGAAGAAGATCAGAGAGCGCAAAACCTATATTTATACAGACAAGAAGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAGTACAATCAGCAAAACATGAGCAACTACTTATCTTTCGGAGTGGGTCCAAGCCGAAGAAACTTCATGAACGTCTCTGAGCATAATTCATCAAGATCAGGAGGAGGAGGGGTGAATTGCCAAGACTGTGGAAATCAAGCCAAGAAAGACTGTGCTTATTTGAGGTGTAGAACTTGTTGTAAAAGCAGAGGGTTTCAATGTCAAACCCATGTCAGAAGCACGTGGGTTCCGGCAGCTAAACGCCGGGAGAGGCAGCAGCAACTTGCGGCCTTGCATTGTCAACCGCCGGAAGAGCCACCGCAGCCGCGTGGAGGAGAGAAGACGAAAAAGATTAGGGATCTTCAGGTGGCAGATTCTTCTTTACTTGCTGGCTCTCGTTTACCCACCATTACATCAGGGTTAGAGCTGACGCAGTTCCCAGCTGAAGTGAATTCCCCAGCCGTGTTTCGTTGCGTAAAAGTCAGCCCAGTATATGACGCAGATGAACAGTTTGCATATCAGACGGCTGTAAACATCGGCGGACATGTTTTCAAAGGAATTCTTTATGACCAAGGGCTAGAAAGTCGTTACGCCGGCGGGGGTGGTGAAAGCTCCTCCGCCCACGGCGCAGATGGAGCTCAGCAACTTAATCTTATTACAGGACCCTCCGACACCATAGCCACTGCAACTACTAGTAATCCTTCTGCTACAATGCTAGAATATCCAGCTCCCCTTACTGCATTCATAGCTGGTACGCAATTCTTCCCACCTTCAAGGCCATGA 906 48.01 MASFFYLGDRDQDPRNKESEGEEEDQRAQNLYLYRQEEIYNKGFEIWPQYNQQNMSNYLSFGVGPSRRNFMNVSEHNSSRSGGGGVNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVRSTWVPAAKRRERQQQLAALHCQPPEEPPQPRGGEKTKKIRDLQVADSSLLAGSRLPTITSGLELTQFPAEVNSPAVFRCVKVSPVYDADEQFAYQTAVNIGGHVFKGILYDQGLESRYAGGGGESSSAHGADGAQQLNLITGPSDTIATATTSNPSATMLEYPAPLTAFIAGTQFFPPSRP 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 24256003 24257365 - BLOR08308 Blo17g00762 73150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00762 301 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 87 129 IPR006510 -
Blo17g00762 301 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 298 IPR007818 GO:0003700|GO:0006355
Blo17g00762 301 MobiDBLite consensus disorder prediction 10 27 - -
Blo17g00762 301 Pfam Domain of unknown function (DUF702) 85 235 - -
Blo17g00762 301 MobiDBLite consensus disorder prediction 1 27 - -
Blo17g00762 301 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 186 234 IPR006511 -
Blo17g00762 301 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 298 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01581 Blo17g00762 CCT
Blo01g01581 Blo17g00762 ECH
Blo17g00762 Blo18g00791 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00964 Blo-Chr3:35714915 Blo17g00762 Blo-Chr17:24256003 6.72E-48 dispersed
Blo01g01581 Blo-Chr1:55617084 Blo17g00762 Blo-Chr17:24256003 1.72E-113 wgd
Blo17g00762 Blo-Chr17:24256003 Blo18g00791 Blo-Chr18:22983635 6.62E-165 wgd
Blo17g00762 Blo-Chr17:24256003 Blo04g00529 Blo-Chr4:4553860 1.95E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13539 PF05142 DUF702 1.90E-63 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00762 - - jre:108991308 378.252