Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00769 ATGGATTTGGGAGGGAATAGGCAGCAGGTGAAGAAGGTGAAGAAGGTGAAGCCTGCGCAGGCTAGTTCTAGGAAAGGTTGCATGAGAGGCAAAGGCGGGCCTGAAAATGCGACCTGCACTTACAAAGGCGTCCGCCAGAGAACTTGGGGCAAATGGGTCGCTGAAATACGAGAACCCAATAGAGGAAATCGCCTCTGGTTAGGCACGTTTGACACTTCTCATGAAGCAGCTGTGGCCTACGATGCTGCCGCTCGTAAACTCTACGGAACCGATGCAAAGCTGAATTTGCCTGATCTGTGTCATCATTATCCACTCCATTCTGCTGCTACCCAGATGAGCCAAATAGATTTCCAGGCTCAGTTATTGCTTGATTCAGACACTGCTTCTTCTTCTACTTCAGTCCACGATGGCGGCTCTATCTCGCCTTCTTCTTGTGAAAATGGCGATTCTTGTGGAGACAAGGTTGGAAATCGTTGCAAGCAATTCGGTGAGGGGATTGAAGGGCTATGGCGGAGCATGAGCTTGACCTTTGACGACTCCTTGTGGGCAGAAGCTGCAATGTCTTTGAACTTTCCAGTAATGGAAGACGATGGAAGAGGGTTGGACAGTTTACAGTACTGGTGCATGTAA 630 49.37 MDLGGNRQQVKKVKKVKPAQASSRKGCMRGKGGPENATCTYKGVRQRTWGKWVAEIREPNRGNRLWLGTFDTSHEAAVAYDAAARKLYGTDAKLNLPDLCHHYPLHSAATQMSQIDFQAQLLLDSDTASSSTSVHDGGSISPSSCENGDSCGDKVGNRCKQFGEGIEGLWRSMSLTFDDSLWAEAAMSLNFPVMEDDGRGLDSLQYWCM 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 24518640 24519269 - BLOR08315 Blo17g00769 73157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00769 209 CDD AP2 39 99 IPR001471 GO:0003700|GO:0006355
Blo17g00769 209 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Blo17g00769 209 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D-LIKE 5 199 - -
Blo17g00769 209 MobiDBLite consensus disorder prediction 1 32 - -
Blo17g00769 209 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Blo17g00769 209 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Blo17g00769 209 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 5 199 - -
Blo17g00769 209 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Blo17g00769 209 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Blo17g00769 209 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Blo17g00769 209 SUPERFAMILY DNA-binding domain 40 98 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00898 Blo17g00769 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00898 Blo-Chr12:27174580 Blo17g00769 Blo-Chr17:24518640 3.41E-50 dispersed
Blo13g00846 Blo-Chr13:31104339 Blo17g00769 Blo-Chr17:24518640 1.93E-29 dispersed
Blo17g00693 Blo-Chr17:18708676 Blo17g00769 Blo-Chr17:24518640 1.15E-25 dispersed
Blo17g00769 Blo-Chr17:24518640 Blo12g00700 Blo-Chr12:25285115 2.63E-25 dispersed
Blo17g00769 Blo-Chr17:24518640 Blo11g00041 Blo-Chr11:335156 1.44E-26 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13540 PF00847 AP2 3.10E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00769 - - tcc:18591467 231.106