Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00786 ATGGGTTTGCCTAAGAATGGCTCCGAAGTCCCTCTCGTTCTCGGTCTCCAACCCTCTGCCCTCATCGACCACGTTGCTTGCGTCGATTGGTCACTCCTTGATCAAATCCCCGGTGACCGCGGGGGTTCTATTCCGGTTGCTAAGGAGGAACTTGAACATATTTTAATGGAGATAAAAACCCATGCACTATCCTCCCCCGCATCTCTTATAAAGACAATGGCTGGGGGAAGTGTTGCCAATACAATTAGAGGGCTGAGTGCTGGTTTTGGAGTCAGCTGTGGTTTAATTGGGGTCCGAGGGAATGATGATCAAGGCATCTTGTTTGCTAAAAACATGAGCTCTAATGGAGTAAATCTCTCAAGGTTAAGATTGAAAACAGGTTCCACAGCTCAGCCCTTTCGTAAGAACATCTGCTTTCATCCTTTATTGCTGATCTTTGAATTGTCAGGTTATGAGTTAGCATTATTAATTTGTGTTTGCCTGGTTGATGCTTTGGGAAATCGCACAATGCGTCCATGTCTCTCCAGTGCTGTTAAAATCCAGGCAGATGACTTGACTCGAGAGGATCTTAAAGGTTCTAAGTGGTTGATCATGAGATATGGAAAAATTAACTTGGAAGTGATTCATGCAGCCATAAGAATTGCCAAACAGGAGAAAGTTTCTGTGTCTTTGGATTTGGCGAGTTTTGAGATGGTTCGAGACTTCAGATTACCTCTTCTTGAATTATTGGAGTCGGGTGATATAAACCTTTGCTTCGCCAACGAGGATGAGGCAAAAGAGTTGTTAAGTTCTGAACAGAATGCAGATCCTGAGTTGGCATTAGAACTTCTGGCAAAACACTGCCAATGGGCGGTGGTGACACTAGGGCCCAATGGATGCATCGCAAAGCATGGAAAAGAGATTGTCAGAGTTCCGGCTATAGGGGGAGGCAATCCGAGAGATGCAACAGGAGCTGGAGACTTGTTTGCAAGTGGGTTTATATATGGATTAGTGAAGGGATTATCTCTAGAAAAGTGCTGCCAAATAGGTTCGTGCAGTGGAGGGTCTGTTATTCGCTCCCTGGGCGGGGAGGTGACTCCTGAGAATTGGCAGTGGATGCATAAGCAAATGCTGTCCAAGGGCCTTCTTCCTCCTGATGCCTGCAAATAG 1149 45.78 MGLPKNGSEVPLVLGLQPSALIDHVACVDWSLLDQIPGDRGGSIPVAKEELEHILMEIKTHALSSPASLIKTMAGGSVANTIRGLSAGFGVSCGLIGVRGNDDQGILFAKNMSSNGVNLSRLRLKTGSTAQPFRKNICFHPLLLIFELSGYELALLICVCLVDALGNRTMRPCLSSAVKIQADDLTREDLKGSKWLIMRYGKINLEVIHAAIRIAKQEKVSVSLDLASFEMVRDFRLPLLELLESGDINLCFANEDEAKELLSSEQNADPELALELLAKHCQWAVVTLGPNGCIAKHGKEIVRVPAIGGGNPRDATGAGDLFASGFIYGLVKGLSLEKCCQIGSCSGGSVIRSLGGEVTPENWQWMHKQMLSKGLLPPDACK 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 25154165 25156792 - BLOR08332 Blo17g00786 73174

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00786 382 PANTHER CARBOHYDRATE KINASE-LIKE 158 372 - -
Blo17g00786 382 SUPERFAMILY Ribokinase-like 64 356 IPR029056 -
Blo17g00786 382 PANTHER SUGAR KINASE 158 372 - -
Blo17g00786 382 PANTHER SUGAR KINASE 10 131 - -
Blo17g00786 382 CDD adenosine_kinase 13 355 - -
Blo17g00786 382 PANTHER CARBOHYDRATE KINASE-LIKE 10 131 - -
Blo17g00786 382 Gene3D - 16 359 IPR029056 -
Blo17g00786 382 Pfam pfkB family carbohydrate kinase 158 356 IPR011611 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00786 - - - mcha:111014039 536.569
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g967 . . . . . . . . Cmo05g00262 Cmo12g00406 . . . Car12g00431 . . Cpe07g00408 Bhi04g00190 . . . Hepe10g0623 . . Cla08g01471 Cam08g1959 Cec08g1534 Cco08g1672 Clacu08g1649 . Cre08g1434 Cone4ag1920 Cone7ag1832 . . . . . Cme03g01937 Blo17g00786 . Bda08g01276 . . Bpe05g00101 . Bma05g00129 . . . Cma12g00456 Cma05g00257 Car05g00214 . Cpe11g00212 . . . . . . . . . . . . . . . Lsi08g01381 Csa02g02070 Chy03g01442 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006701 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 1 3 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo17g00786 Blo_Chr17 FPKM 15.083381 13.299638 23.003851 24.46703 27.968206 25.162374 33.381187 30.620314 28.172802 32.561382