Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00792 ATGGCGGAGAAGAGCAAGGTTTTGATAATCGGCGGCACCGGCTACATTGGAAAGTTCATCGTTGAAGCAAGTGTAAAGGCCGGCCATCCGACATTTGCTCTTGTCAGAGAGAGCACAGTCTCCGATCCCGTGAAAGGAAAACTCGTCGAGAAGTTTAAGAACTCGGGAGTCACTCTGCTCTACGGAGATATTTACGATCATGAGAGTTTGGTAAAGGCGATCACACTAACGGACGTGGTGATTTCAACCGTCGGACATTTGCAGATAGCCGATCAGGTCAAGATCATCGCTGCAATTAAAGAATCTGGAAGTGTAAAAAGATTTTTTCCCTCTGAGTTCGGGAATGATGTTGATCGAGTTCACGCAGTTGAGCCAGCAAAATCGGCGTTTGCCCTAAAGGGTCAAATCCGCCGGGCTATTGAAGAAGAGAAAATACCGTACACATTTGTTTCATCTAACTTCTTCAATGGCTATTTTCTTCCCACACTGGGTCAGCCGGGTCTGACTGCTCCGCCAAGGGACAAAGTCACCATCATTGGAAATGGAAACCTCAAAGCAATTTTCAACAAGGAAGAAGATATTGGATCATATACAATCAAAGCCATAGATGACCCAAGAACATTGAACAAAATCCTCTACCTCAGGCCACCGAAGAACATATACTCATTTAACGAGCTCGTTGCTTTGTGGGAGAAAAAGATCGGCAAAACCTTGGAGAAAGTCCACATTCCTGAGGAACAGATTCTCAAAGACATACAAGAAATTTCATGGTACATTCGCAACTCTGCTGCAAACATTCCAATGGCGGAGAAGAGCAAGGTTTTGATAATCGGCGGCACCGGCTACATTGGAAAGTTCATCGTTGAAGCAAGTGCAAAGGCCGGCCATCCGACATTTGCTCTTGTCAGAGAGAGCACAGTCTCCGATCCCGTGAAAGGAAAACTCGTCGAGAAGTTTAAGAACTCAGGAGTCACTTTGCTCTACGGAGATATTTACGATCATGAGAGTTTGGTAAAGGCAATCAAACTAGCGGACGTGGTGATTTCAACCGTCGGACATATGCTGATAGCCGATCAGGTCAATATCATCGCTGCAATTAAAGAAGCTGGAAATGTAAAAAGATTTTTTCCTTCTGAATTCGGGAGTGATGTTGATCGAGTTCACGTAGTTGAGCCTGCAAAATCGGCGGTTGCCCTAAAGGTTCATATCCGCCGGACTATTGAAGAAGAGAAGATACCGTACACATTTGTTTCATGTAACTGCTTCAATGGCTATTTTCTTCCCACACTGGCTCAGCAGGGTCTGACTGCTCCGCCAAGGGACAAAGTCACCATCATTGGAAATGGAAATCCCAAAGCAATTTTCAACAAGGAAGAAGATATTGGATCATATACAATCAAAGCCATAGATGACCCAAGAACATTGAACAAAATCCTCTACCTCAGGCCACCGAAGAACATCTACTCATTTAACGAGCTCGTTGCTTTGTGGGAGAAAAAGATCGGCAAAACCTTGGAGAAAGTCCACATTCCTGAGGAACAGATTCTCAAAGACATACAAGCATCTCCATTTCCCATCAATGTGGTATTATCAATCAACCACTCAGTTTTAGTGAAAGGAGATCATACTAACTTTGAAATTGAATCATCATTTGGAGTGGAGGCCTCCGAGTTATACCCAGATGTGAAATACACCACAGTGGAAGAGTATCTTGACCAGTTTGTTTGA 1728 44.04 MAEKSKVLIIGGTGYIGKFIVEASVKAGHPTFALVRESTVSDPVKGKLVEKFKNSGVTLLYGDIYDHESLVKAITLTDVVISTVGHLQIADQVKIIAAIKESGSVKRFFPSEFGNDVDRVHAVEPAKSAFALKGQIRRAIEEEKIPYTFVSSNFFNGYFLPTLGQPGLTAPPRDKVTIIGNGNLKAIFNKEEDIGSYTIKAIDDPRTLNKILYLRPPKNIYSFNELVALWEKKIGKTLEKVHIPEEQILKDIQEISWYIRNSAANIPMAEKSKVLIIGGTGYIGKFIVEASAKAGHPTFALVRESTVSDPVKGKLVEKFKNSGVTLLYGDIYDHESLVKAIKLADVVISTVGHMLIADQVNIIAAIKEAGNVKRFFPSEFGSDVDRVHVVEPAKSAVALKVHIRRTIEEEKIPYTFVSCNCFNGYFLPTLAQQGLTAPPRDKVTIIGNGNPKAIFNKEEDIGSYTIKAIDDPRTLNKILYLRPPKNIYSFNELVALWEKKIGKTLEKVHIPEEQILKDIQASPFPINVVLSINHSVLVKGDHTNFEIESSFGVEASELYPDVKYTTVEEYLDQFV 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 25281445 25287326 - BLOR08338 Blo17g00792 73180

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00792 575 Pfam NmrA-like family 7 237 IPR008030 -
Blo17g00792 575 Pfam NmrA-like family 274 564 IPR008030 -
Blo17g00792 575 Gene3D - 273 561 - -
Blo17g00792 575 CDD PCBER_SDR_a 273 570 IPR045312 GO:0016491
Blo17g00792 575 Gene3D - 6 213 - -
Blo17g00792 575 CDD PCBER_SDR_a 6 254 IPR045312 GO:0016491
Blo17g00792 575 PANTHER PINORESINOL REDUCTASE-RELATED 2 256 - -
Blo17g00792 575 PANTHER PINORESINOL REDUCTASE-RELATED 269 575 - -
Blo17g00792 575 Gene3D - 152 256 - -
Blo17g00792 575 Gene3D - 421 571 - -
Blo17g00792 575 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 271 531 IPR036291 -
Blo17g00792 575 PANTHER ISOFLAVONE REDUCTASE HOMOLOG P3-RELATED 2 256 - -
Blo17g00792 575 PANTHER ISOFLAVONE REDUCTASE HOMOLOG P3-RELATED 269 575 - -
Blo17g00792 575 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 254 IPR036291 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00792 K23050 PCBER1; phenylcoumaran benzylic ether reductase [EC:1.3.1.-] - mnt:21392364 516.153
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00484 Blo-Chr1:5295632 Blo17g00792 Blo-Chr17:25281445 3.92E-45 dispersed
Blo02g01225 Blo-Chr2:44366239 Blo17g00792 Blo-Chr17:25281445 7.40E-125 dispersed
Blo02g01226 Blo-Chr2:44374075 Blo17g00792 Blo-Chr17:25281445 0 dispersed
Blo03g00895 Blo-Chr3:34952975 Blo17g00792 Blo-Chr17:25281445 1.41E-77 dispersed
Blo03g00896 Blo-Chr3:34966684 Blo17g00792 Blo-Chr17:25281445 2.96E-71 dispersed
Blo02g00805 Blo-Chr2:27837245 Blo17g00792 Blo-Chr17:25281445 2.40E-24 transposed
Blo05g00556 Blo-Chr5:11936383 Blo17g00792 Blo-Chr17:25281445 1.19E-114 transposed
Blo05g00802 Blo-Chr5:29358545 Blo17g00792 Blo-Chr17:25281445 5.66E-107 transposed
Blo16g01051 Blo-Chr16:39008208 Blo17g00792 Blo-Chr17:25281445 1.12E-61 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g963 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo17g00792 . . . . . . Bma05g00127 . . . . . . . . . . . . . . . . Cla11g00408 Cam11g0454 Cec11g0450 Cco11g0441 Clacu11g0579 Cmu11g0437 Cre11g0918 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000111 5 10 6 7 3 10 5 11 9 7 10 9 5 7 11 5 9 5 6 10 8 9 7 8 12 9 8 7 9 7 234
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo17g00792 Blo_Chr17 FPKM 19.194063 20.313393 7.376334 6.185346 7.446777 5.848352 6.522484 13.350968 12.250671 12.154397