Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo17g00796 | ATGGATGTTGGTGAGCTAAACAAAGAAACGAGAACACCAGGTGAGTCGCCCTCTTCCATATTTTCCCACCTCATAGGAGAATCTTCCGCCCGAGTTGACGCCAGAAGATCATCAGAAGCAGCTCACACTGGAGTTAATTTTCCTCATCTTCTTCGCCAAGAATCACTCGGCCAACAAAGAGACATCGATTCCGAAAGACTAGCTTTACCAGAAGAGAATATTGCCTCGTGTCATGGTAGATCTAAACAGAGAAACTCACCTGCCGGTGCCGTTAGATATCGGGAGTGTCTAAAGAACCACGCGGCAAACGTCGGCGGTAACATTTACGATGGCTGTGGGGAGTTCATGCCGAACGGAGAAGACGGAACCCTAGAAGCTTTGAAATGCGCTGCTTGCGAATGCCACAGAAATTTCCACCGGAAAGAAATCGACGGCGAGCGACAATTGATGAGTCCAACCTCGAGAAGAACCATAGTCCTCAATCACCTCCAGCTTCCACCGCCATTGCCATCGCCCCACCACCATAAATTCTCAATGGGCGGCCTGAATTTCCATTCAAGCCCTAACGCTCCGATCGTCGCGCCTATGAACGTTGCTTTCGGCCGAAACGAGTCATCAAGCGAAGATCTAAACGTTTTTCAGTCCAACGCAGAAGCAACTACATACCCACCATTTTCTCTCTCCAAGAAAAGGTTCAGAACAAAGTTCACTCAAGAACAGAAGAACAAAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGAAAAAGCAAGACGAACATGAAGCAGACAAGTTCTGCGCTAAAGTTGGACTAAAGACACAAGTTCTAAAGGTATGGATGCACAACAACAAGACGGGCACCATTAAAAAGCAAAACGATAATCATGATCAAACCTTGGACATAACTGGAGCAGATGATGAAATGATTGACTTGGAAAAGCTAGATTAG | 951 | 46.58 | MDVGELNKETRTPGESPSSIFSHLIGESSARVDARRSSEAAHTGVNFPHLLRQESLGQQRDIDSERLALPEENIASCHGRSKQRNSPAGAVRYRECLKNHAANVGGNIYDGCGEFMPNGEDGTLEALKCAACECHRNFHRKEIDGERQLMSPTSRRTIVLNHLQLPPPLPSPHHHKFSMGGLNFHSSPNAPIVAPMNVAFGRNESSSEDLNVFQSNAEATTYPPFSLSKKRFRTKFTQEQKNKMLEFAEKVGWRMKKQDEHEADKFCAKVGLKTQVLKVWMHNNKTGTIKKQNDNHDQTLDITGADDEMIDLEKLD | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 25617141 | 25618091 | - | BLOR08342 | Blo17g00796 | 73184 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo17g00796 | 316 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 59 | 292 | - | - | |
Blo17g00796 | 316 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 229 | 285 | IPR006455 | - | |
Blo17g00796 | 316 | SUPERFAMILY | Homeodomain-like | 224 | 286 | IPR009057 | - | |
Blo17g00796 | 316 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Blo17g00796 | 316 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 93 | 142 | IPR006456 | - | |
Blo17g00796 | 316 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 5 | 59 | 292 | - | - | |
Blo17g00796 | 316 | Pfam | ZF-HD protein dimerisation region | 91 | 143 | IPR006456 | - | |
Blo17g00796 | 316 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 92 | 143 | IPR006456 | - | |
Blo17g00796 | 316 | Gene3D | - | 215 | 289 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo17g00796 | Blo18g00811 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00916 | Blo-Chr4:10741087 | Blo17g00796 | Blo-Chr17:25617141 | 1.11E-61 | dispersed | |
Blo15g00309 | Blo-Chr15:3512138 | Blo17g00796 | Blo-Chr17:25617141 | 2.77E-22 | dispersed | |
Blo16g00046 | Blo-Chr16:1874806 | Blo17g00796 | Blo-Chr17:25617141 | 4.72E-60 | dispersed | |
Blo17g00796 | Blo-Chr17:25617141 | Blo18g00229 | Blo-Chr18:2257098 | 1.19E-43 | dispersed | |
Blo17g00796 | Blo-Chr17:25617141 | Blo18g00811 | Blo-Chr18:23935729 | 8.72E-171 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13542 | PF04770 | ZF-HD_dimer | 2.30E-29 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo17g00796 | - | - | csv:101216040 | 336.65 |