Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00796 ATGGATGTTGGTGAGCTAAACAAAGAAACGAGAACACCAGGTGAGTCGCCCTCTTCCATATTTTCCCACCTCATAGGAGAATCTTCCGCCCGAGTTGACGCCAGAAGATCATCAGAAGCAGCTCACACTGGAGTTAATTTTCCTCATCTTCTTCGCCAAGAATCACTCGGCCAACAAAGAGACATCGATTCCGAAAGACTAGCTTTACCAGAAGAGAATATTGCCTCGTGTCATGGTAGATCTAAACAGAGAAACTCACCTGCCGGTGCCGTTAGATATCGGGAGTGTCTAAAGAACCACGCGGCAAACGTCGGCGGTAACATTTACGATGGCTGTGGGGAGTTCATGCCGAACGGAGAAGACGGAACCCTAGAAGCTTTGAAATGCGCTGCTTGCGAATGCCACAGAAATTTCCACCGGAAAGAAATCGACGGCGAGCGACAATTGATGAGTCCAACCTCGAGAAGAACCATAGTCCTCAATCACCTCCAGCTTCCACCGCCATTGCCATCGCCCCACCACCATAAATTCTCAATGGGCGGCCTGAATTTCCATTCAAGCCCTAACGCTCCGATCGTCGCGCCTATGAACGTTGCTTTCGGCCGAAACGAGTCATCAAGCGAAGATCTAAACGTTTTTCAGTCCAACGCAGAAGCAACTACATACCCACCATTTTCTCTCTCCAAGAAAAGGTTCAGAACAAAGTTCACTCAAGAACAGAAGAACAAAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGAAAAAGCAAGACGAACATGAAGCAGACAAGTTCTGCGCTAAAGTTGGACTAAAGACACAAGTTCTAAAGGTATGGATGCACAACAACAAGACGGGCACCATTAAAAAGCAAAACGATAATCATGATCAAACCTTGGACATAACTGGAGCAGATGATGAAATGATTGACTTGGAAAAGCTAGATTAG 951 46.58 MDVGELNKETRTPGESPSSIFSHLIGESSARVDARRSSEAAHTGVNFPHLLRQESLGQQRDIDSERLALPEENIASCHGRSKQRNSPAGAVRYRECLKNHAANVGGNIYDGCGEFMPNGEDGTLEALKCAACECHRNFHRKEIDGERQLMSPTSRRTIVLNHLQLPPPLPSPHHHKFSMGGLNFHSSPNAPIVAPMNVAFGRNESSSEDLNVFQSNAEATTYPPFSLSKKRFRTKFTQEQKNKMLEFAEKVGWRMKKQDEHEADKFCAKVGLKTQVLKVWMHNNKTGTIKKQNDNHDQTLDITGADDEMIDLEKLD 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 25617141 25618091 - BLOR08342 Blo17g00796 73184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00796 316 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 59 292 - -
Blo17g00796 316 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 229 285 IPR006455 -
Blo17g00796 316 SUPERFAMILY Homeodomain-like 224 286 IPR009057 -
Blo17g00796 316 MobiDBLite consensus disorder prediction 1 21 - -
Blo17g00796 316 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 93 142 IPR006456 -
Blo17g00796 316 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 5 59 292 - -
Blo17g00796 316 Pfam ZF-HD protein dimerisation region 91 143 IPR006456 -
Blo17g00796 316 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 92 143 IPR006456 -
Blo17g00796 316 Gene3D - 215 289 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00796 Blo18g00811 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00916 Blo-Chr4:10741087 Blo17g00796 Blo-Chr17:25617141 1.11E-61 dispersed
Blo15g00309 Blo-Chr15:3512138 Blo17g00796 Blo-Chr17:25617141 2.77E-22 dispersed
Blo16g00046 Blo-Chr16:1874806 Blo17g00796 Blo-Chr17:25617141 4.72E-60 dispersed
Blo17g00796 Blo-Chr17:25617141 Blo18g00229 Blo-Chr18:2257098 1.19E-43 dispersed
Blo17g00796 Blo-Chr17:25617141 Blo18g00811 Blo-Chr18:23935729 8.72E-171 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13542 PF04770 ZF-HD_dimer 2.30E-29 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00796 - - csv:101216040 336.65