Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00831 GAGAGCTTCATGCCTTCTTCCAAAAAATGCAATCCTGATCAAATCGGATCAGGTTATAACTCCTCGGTGAGTCAACCGGAATCGTTGGCTCAGCGGCGGTTCACGAGGCAGAGGAAGCTCAGACACCTCAGTGACGACGACACAGGCATTCATTTCCACCATCATCCTCAGTCGACGCCGACGTCGCCTGATTCGTTGAGAACACATAGGTCAATGGTTGGTTGTTCGGAACGTTGGTCGCCATCGGCAGTACCCCAGCCTTTACCCCTTCCCGAGTTCAATTCAAGCCGGAAAGCCGAGTCTCCGGCTTCGAAGAGCCTTGGTCCAGTTATATTGAATTCAGCTAAAACTTTAGGAAACTGTCAAAAGAAAGTCCCGAGAGACGTAAATAGCGACAGTGTTGATGTTAATTGTGGGCAAACTCTTTTGGCGTCGAGGTCGTCACCAATTATAGGATCGTCTGGAGGAACAGTTAGTCCAAGAGGATCAGGTAGAAATGATTTGTTTCGGTCTTGTGTCGATACAAGTCCTGCGGAATGTTCAAATAAATATGGTAGGAGACTCTTTCAAGATCTAAACGACGAGAGAGGGGGTGAAAGATTGACTCTGAAAGTGTCTTCCAGGAGCACGCCAACTAGTGTTTTGTCGAGTCCAGTTGTTAGCCCAAGGAGATCGAATACCGGAGATTTTTACACGTCTGTTGCGGATCCTCAACAATTTAAAGATTTCCCTTCGGCCGGGCTGGCTAAAATATCGACGCCTAGAATTGCCAGTAGTCCTCCCGATCGCTCTCCCCCCCACAGCCCCACTGCTCGAAGCCCTCTTCATAATGCAAGATCTCCTAACGGAACCGCCTTTGCTCTGCACCATAAACCATTTCAGGAAATTTTGACAGATAGGCCAGAAAGTAATGGCCATGTTAATGCCTACCCGTTGCCCCTTCCTCCTATGCCTATCGTTTCCTCCCAACCAACGATGAGTCATCATGTAATGGACAATCCATATGCATCGATGATGAAAGGCAAATGGCAGAAAGGAAGACTCATCGGGAGAGGAACGTTCGGGAGCGTTTATCTGGCGACCAACCGGGAGACCGGAGCTTTATGTGCAATGAAAGAAGTGGATCTCATTGCAGATGATCCTAAATCTGCCGAGTGTATGAAGCAATTAGAACAGGAAATTAAAGTTCTTCACAAACTAAAACATCCAAATATTGTGCATTACTATGGAAGTGAAAGAATAGATGATCATTTTTACATATATTTGGAGTATGTTTATCCGGGCTCGATTAATAAGTACATCCGAGAACATTGTGGAGCTATAACAGAATCCGTTGTTCGCAATTTTACGCGTCATATTCTCTCCGGGTTGGCTTACTTGCACGGCAAAAAGACCATACATAGGGATATTAAAGGTGCGAATTTACTTGTTGACGCCTCTGGCGTTGTCAAACTTGCAGATTTTGGGATGGCAAAGCATCTTGCAGGTCAATATGATCTTTCTTTGAAAGGCAGTCCTCACTGGATGGCACCGGAGGTCATAAAGGCTTCGATGCAAGGCAGAAACCCGGATCTTGCTTTTGCAGTGGATATATGGAGCTTGGGTTGTACAATAATTGAAATGCTGAATGGAAAACCTCCATGGAGTGAGTTTGAAGGGCCTTCTGCTATGTTCAAGATCTTGAACAGAAACCCTCCTATACCCGAAACGATATCTTCAGAAGGGAAAGACTTCCTCCATTGTTGCTTTCGAAGAAATCCCGCAGAGAGGCCATCGGCTAATGTGTTACTTGAGCATCCATTTTTATGTCACCTGCATGATGAAAATGTTTCGTTCTCGACTCAAGCATTGTCCACGATGAATCTACAAGAGAAATTGCCGAGTCCTAATGAGCTCACAAGGGTTAAAGTAGACCAGACTTCATCTTCTCCCGGCATTAAGATTACAAATCGGCAATGTCGTAGCCCGTCTTCGAGTTCTTCCACGGAAGCCTCCCTCGCTGCTGTGAACAACCATCTCTTTGGTATTTCAAGGAATCATGGAAGAGAAGTCGAACATCTTTGA 2064 45.74 ESFMPSSKKCNPDQIGSGYNSSVSQPESLAQRRFTRQRKLRHLSDDDTGIHFHHHPQSTPTSPDSLRTHRSMVGCSERWSPSAVPQPLPLPEFNSSRKAESPASKSLGPVILNSAKTLGNCQKKVPRDVNSDSVDVNCGQTLLASRSSPIIGSSGGTVSPRGSGRNDLFRSCVDTSPAECSNKYGRRLFQDLNDERGGERLTLKVSSRSTPTSVLSSPVVSPRRSNTGDFYTSVADPQQFKDFPSAGLAKISTPRIASSPPDRSPPHSPTARSPLHNARSPNGTAFALHHKPFQEILTDRPESNGHVNAYPLPLPPMPIVSSQPTMSHHVMDNPYASMMKGKWQKGRLIGRGTFGSVYLATNRETGALCAMKEVDLIADDPKSAECMKQLEQEIKVLHKLKHPNIVHYYGSERIDDHFYIYLEYVYPGSINKYIREHCGAITESVVRNFTRHILSGLAYLHGKKTIHRDIKGANLLVDASGVVKLADFGMAKHLAGQYDLSLKGSPHWMAPEVIKASMQGRNPDLAFAVDIWSLGCTIIEMLNGKPPWSEFEGPSAMFKILNRNPPIPETISSEGKDFLHCCFRRNPAERPSANVLLEHPFLCHLHDENVSFSTQALSTMNLQEKLPSPNELTRVKVDQTSSSPGIKITNRQCRSPSSSSSTEASLAAVNNHLFGISRNHGREVEHL 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 27019624 27023171 + BLOR08377 Blo17g00831 73219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00831 687 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 18 101 - -
Blo17g00831 687 Pfam Protein kinase domain 344 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00831 687 SUPERFAMILY Protein kinase-like (PK-like) 338 614 IPR011009 -
Blo17g00831 687 MobiDBLite consensus disorder prediction 1 105 - -
Blo17g00831 687 MobiDBLite consensus disorder prediction 39 53 - -
Blo17g00831 687 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Blo17g00831 687 MobiDBLite consensus disorder prediction 54 69 - -
Blo17g00831 687 Gene3D Transferase(Phosphotransferase) domain 1 335 667 - -
Blo17g00831 687 MobiDBLite consensus disorder prediction 640 664 - -
Blo17g00831 687 MobiDBLite consensus disorder prediction 253 285 - -
Blo17g00831 687 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 178 661 - -
Blo17g00831 687 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 18 101 - -
Blo17g00831 687 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 178 661 - -
Blo17g00831 687 MobiDBLite consensus disorder prediction 1 31 - -
Blo17g00831 687 SMART serkin_6 343 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00831 687 ProSiteProfiles Protein kinase domain profile. 343 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00831 687 MobiDBLite consensus disorder prediction 204 233 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00646 Blo-Chr5:20906063 Blo17g00831 Blo-Chr17:27019624 4.75E-170 dispersed
Blo06g01135 Blo-Chr6:34801017 Blo17g00831 Blo-Chr17:27019624 4.07E-101 dispersed
Blo17g00831 Blo-Chr17:27019624 Blo18g00199 Blo-Chr18:1953006 4.66E-73 dispersed
Blo17g00831 Blo-Chr17:27019624 Blo09g00076 Blo-Chr9:1371274 4.24E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84804 PF00069 Pkinase 1.60E-69 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00831 - - cmo:103487921 697.967