Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00848 ATGGTCTTCTTCTCCAGATCGAGACTTCTTCTCCTCTTCTTCACTGTCTTCTTCGCGGTGAGAGAGAAAGGGCTCTGCGACGAAGCTAGGTACCGACGGTCTCCCTCATTCTTCTCTAGACGAAGTCCTCCGGCTCTAGACGCTAGCCAGTGGAGTTCTCCGGCTTCAACGCAAAATCGCCGAGAAACCACGTTCAGTCTGGAGAAGAATTGCCGATCTGGAGAAGAATCGCCGAGAACCCGCATTCGTTCTGGAGAAGAATCACCCGCCTCCGTTCAGTCTGGAGAAGAATTGCCGGCCTCCGGTGCCCTAGCCCTACGCAGACTGCCGAAATCGAAAGATCCAAGACGAAATCACAGTCTCTCGGCGGAAATCGAATTTTCCCGTCACAGTGTCGCCTACGATAGAGCGAATCGACGATGCTACCAGCTTACGGTCATCACTCTGCAAGTCCGAAGTCGTCCACTCCGGGCTCCAGCGCAGACGCAACGCTCTGCTGTTGATTCTGTAGATAATTTCACCAATGGAAATCTCAAAAATTGTTTCGTTCTGTTTGGCAGTGTTGATTGGTCTTTCAACAAAATTGCTGTGCGTAAAATGGAGAATAATGATGAAGAGGGTGAAGAGTTTGGATTCTCAAGGAACTATTTTTTGGCGAAAGAAATGGGGGGCTCATCTAAGAAATCAACTCACACGCTCTCTGACATTGATATCGTCGATGAACAGTGCTGGTTCATTTATTTATTAAACTTTTTCAGATGCGGTTTTGGTCTTTTGATGTATGGATTTGGATCTAAGAAAGCGTTGATTGAAGATTTTGCTTCAATTGCATTAAGTGAATATTCTGTTGTTGTAGTCAATGGTTATCTTCAATCTGTTAATATTAAACAGGTTTTAGTAGCCTTGGCTGAAGTTCTGTGGGATCAAATGAAAATCAGACGAGGCAATCTGCCTAAAGGCCAACAACCGTTTAATTCTCGATCAGTGGATGACCTTATTTCCTTTTTGGATGGACCAAAGTTGGAGGAAAATGATCCTTTTATATGTGTTGTAATTCATAACATTGATGGTCCCGGATTAAGAGATTCTGGCGTGCAACAATATTTGGGTCGACTCGCATCTTGCTCCCATATTCGTATTATTGCCTCTATTGACCATATTAATGCGCCACTATTATGGGACAAGAAGATGGTTCACACCCAGTTTAACTGGTGTTGGTATCATGTTCCTACCTTTGCACCATATACAGTCGAAGGCGCATTCTTTCCATTGATTCTTGCGCAGGGAAGCTCAGGCCAAAGTGCAAAAACTGCATCAATCGTTTTGCAGAGTTTGACGCCCAATGCTCAAAGCGTTTTCAAAGTTCTGGCTAAACATCAACTCTCTCATCCAGATGAAGAAGGAATGCCAATAAACGATTTGTATGCGGTTTGTCGAGAGTTGTTCTTGGTGAGTAGTCAGATTACACTGAACTCCCACTTGACCGAGTTTAAAGACCATGAGTTGGTGAAGACGAGAAGGCTGGCCGATGGGCAGGATTGCTTGTGCATTCCCCTCTCATCAGAAGCACTTGAAAAGCTATTGCTGGAGATTAGATAG 1599 44.72 MVFFSRSRLLLLFFTVFFAVREKGLCDEARYRRSPSFFSRRSPPALDASQWSSPASTQNRRETTFSLEKNCRSGEESPRTRIRSGEESPASVQSGEELPASGALALRRLPKSKDPRRNHSLSAEIEFSRHSVAYDRANRRCYQLTVITLQVRSRPLRAPAQTQRSAVDSVDNFTNGNLKNCFVLFGSVDWSFNKIAVRKMENNDEEGEEFGFSRNYFLAKEMGGSSKKSTHTLSDIDIVDEQCWFIYLLNFFRCGFGLLMYGFGSKKALIEDFASIALSEYSVVVVNGYLQSVNIKQVLVALAEVLWDQMKIRRGNLPKGQQPFNSRSVDDLISFLDGPKLEENDPFICVVIHNIDGPGLRDSGVQQYLGRLASCSHIRIIASIDHINAPLLWDKKMVHTQFNWCWYHVPTFAPYTVEGAFFPLILAQGSSGQSAKTASIVLQSLTPNAQSVFKVLAKHQLSHPDEEGMPINDLYAVCRELFLVSSQITLNSHLTEFKDHELVKTRRLADGQDCLCIPLSSEALEKLLLEIR 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 27759225 27766271 + BLOR08394 Blo17g00848 73236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00848 532 MobiDBLite consensus disorder prediction 43 64 - -
Blo17g00848 532 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 252 530 IPR007220 GO:0000808|GO:0005634|GO:0006260
Blo17g00848 532 MobiDBLite consensus disorder prediction 65 83 - -
Blo17g00848 532 MobiDBLite consensus disorder prediction 36 97 - -
Blo17g00848 532 Pfam Origin recognition complex subunit 2 245 522 IPR007220 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00848 Blo-Chr17:27759225 Blo18g00346 Blo-Chr18:3601672 1.38E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00848 K02604 - csin:114287574 504.982