Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00869 ATGGCGCAGAGATATAACGCCGTTTCTCAGCAAGATTATCCTTCTTCTCTTCTGGATGCTCTGTATTGTTCAGAAGAGCAATGGGAAGGGGAAGATAGAGGTGAAGAAGAAGGAGAAGACATTGTTGAGTATGGATGCAATAGTCGAAACCCTCTTACTCTTTCAGTGCAGGATTTGTTTTGGGATGATGATGAGCTGTTCTCGCTACTCTCGAAGGAACTGCCCAATCGACTCCATACGTCCTTGCTGGAAAACCCACAACTGGCTGGCGCGCGGAGAGAGGCTGTGGAGTGGATGCTGAAGGTCAACGCTCGCTTCTCGTTTTCTGCCCTCACAGCTGTTCTAGCTGTTGATTATTTCGATAGATTTCTCTCTTGCTTCCAACGGCAGAGAGAGAGTCCATGGATGGCCCAGCTTGTTGCTGTGGCTTGCATTTCTCTGGCTGCAAAGGTTGAAGAAACCCAAGTCCCTCTTCTACTGGACCTGCAAGTGGAGGCGAGTAGATTTGTGTTTGAAGCCAAGACGATTAAGAGAATGGAGATTCTTGTCCTCTCCACCCTTCAATGGAGGATGAATCCTGTAAACCCACTTTCTTTTTTGGATTATATTACTAGAAGGCTCGGGTTGAGAACCTATCTGTGTTGTGAATTTCTCAGGAGATGCGAGCGAACACTTCTCTGTGTCATTTTAGATTCAAGGCTTACGTCTTATCTTCCATCTGTTATTGCTACTGCTACAATACTTTACGTTATCAATTGTATAGAACCACGTCTTGGGCTGCAATTTCAAAACCAGCTTCTGGGTATTATTGGAATCAAGAAGGAGAAGGTAGATGATTGTTATGCGCTCATCTTGGAATCATCATCGGAGGACCATGGAGAAAAATCAAACAAACGTAAATGTGGTTCGTCTCCGGGCAGTCCGATTGGAGTAGTAGACTTATCTCTCAGCTCAGATTGTTCAAACGACTCCTGGTCTGCAGCTTCATCATCTGTTTCATCATCACCGGAGCCGTTGTCCAAGAAACTCAGGGCTGAGGAGCAGCTTCTGCGAAAGGTTAATAATAAAACAGTAGCTGTAGATTTTCTCAGCATTCCTCGGTAG 1104 45.38 MAQRYNAVSQQDYPSSLLDALYCSEEQWEGEDRGEEEGEDIVEYGCNSRNPLTLSVQDLFWDDDELFSLLSKELPNRLHTSLLENPQLAGARREAVEWMLKVNARFSFSALTAVLAVDYFDRFLSCFQRQRESPWMAQLVAVACISLAAKVEETQVPLLLDLQVEASRFVFEAKTIKRMEILVLSTLQWRMNPVNPLSFLDYITRRLGLRTYLCCEFLRRCERTLLCVILDSRLTSYLPSVIATATILYVINCIEPRLGLQFQNQLLGIIGIKKEKVDDCYALILESSSEDHGEKSNKRKCGSSPGSPIGVVDLSLSSDCSNDSWSAASSSVSSSPEPLSKKLRAEEQLLRKVNNKTVAVDFLSIPR 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 28497262 28498649 - BLOR08415 Blo17g00869 73257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00869 367 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Blo17g00869 367 PANTHER CYCLINS 49 343 IPR039361 -
Blo17g00869 367 Gene3D - 84 192 - -
Blo17g00869 367 CDD CYCLIN 92 184 IPR013763 -
Blo17g00869 367 Gene3D - 193 282 - -
Blo17g00869 367 PANTHER CYCLIN D3.1 PROTEIN 49 343 - -
Blo17g00869 367 SUPERFAMILY Cyclin-like 195 288 IPR036915 -
Blo17g00869 367 Pfam Cyclin, N-terminal domain 90 192 IPR006671 -
Blo17g00869 367 Pfam Cyclin, C-terminal domain 194 298 IPR004367 -
Blo17g00869 367 SMART cyclin_7 97 185 IPR013763 -
Blo17g00869 367 MobiDBLite consensus disorder prediction 312 340 - -
Blo17g00869 367 SMART Cyclin_C_2 194 320 IPR004367 -
Blo17g00869 367 MobiDBLite consensus disorder prediction 312 338 - -
Blo17g00869 367 SUPERFAMILY Cyclin-like 59 192 IPR036915 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01517 Blo17g00869 CCT
Blo12g00970 Blo17g00869 CCT
Blo01g01517 Blo17g00869 ECH
Blo12g00970 Blo17g00869 ECH
Blo17g00869 Blo18g00706 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00869 Blo-Chr17:28497262 Blo11g00015 Blo-Chr11:137462 2.20E-43 dispersed
Blo01g01517 Blo-Chr1:54732096 Blo17g00869 Blo-Chr17:28497262 4.55E-115 wgd
Blo12g00970 Blo-Chr12:27787416 Blo17g00869 Blo-Chr17:28497262 2.43E-132 wgd
Blo17g00869 Blo-Chr17:28497262 Blo18g00706 Blo-Chr18:16177412 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00869 K14505 - qsu:112022222 392.119