Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00870 ATGGTGAAGAAGAAGAGATCCATTTTGCAGTTCTTGTTTCACCTACTGCAAGGTTTTCTCCTCTGTTTTTCATGCTGCGACTTGGCAGTAGCTGCTTCTTCGCTACCCTCTGATGGAGTTGCGCTTCTGGCATTTGGGTCGAAAGCCGATGTAAATAAGAAGCTCGGGTTCTCCATGAATAACAGCTTACATTTCTGCCATTGGAGAGGAGTTGCTTGCATTCAACACAAGGTGGTGCGACTCGTCCTCCGAGGGTTAGATCTCGGCGGGGTTTTTCCTCCCAATTCAGTGACTCGGCTCGACCAACTTCGAGTTCTGAGTTTGCAGAATAACTCGCTCACTGGTTCGATTCCTGATCTCTCCCGTCTCTTTAATCTTAAAAGTCTGTTTCTTGATCAGAACTTCTTCACCGGTTCTTTTCCGCCGTCGGTTCAGTCACTTCGCAGGCTCCGGACTATTGATTTATCTCACAATAATCTCACCGGTATATTACCCAGTTGGTTAATCAAGCAAGATAGGATTTATTATCTGTGCTTAGAGTGGAATTTTTTCAATGGAAGTGTTCCAGCGTTTAATCAGTCCTCTCTCCAAACTTTTAATGTCTCCGGTAATGATCTCACTGGAGCTATTCCGGTCACGGCGACTCTGCGAAGGTTCGGGCCGACGTCGTTCTTACTTAACCCAGGTCTTTGCGGCGAGGTCATACACAAAGAATGCCATCCCGGACAACCCTTTTTTCGCCCTGCTACTCCGCAACTAGCTCCTCCGTCTCCGGTGGTTCTCGGTCAGAGCGCGGAGGTTCACGGCGTTGAGCTTGCGGAGCCTCCTCAGAAGACGCACAAAAGAATGGCGGTGATAATCGGGTTCTCGTCAGGAGCATTCGTTCTCCTACTTTCATTTCTCTGCTTCTTCACTGCTGTGCGGAAACAGAGAAACAGAAAGGACTCGAAGGCGATAATGGCGTCGGACGCGACAGCAACGGCGGAGGCAGCGGCGGTGATGCGAATAGAAGAAGACAACGAGTTGCAGGAGAAGGTAAAGAGAGTGCAGGGGATGCAGGTGGGTAAAAGCGGGAACCTGGTGTTCTGTGCAGGTGATGTGCAGCTGTATAGCCTGGACCAGCTGATGAGGGCTTCGGCGGAGCTGCTCGGGAGAGGAACAATGGGGACCACATACAAGGCAGTGCTTGATAGCCGACTGATCGTGAGCGTGAAGCGACTTGATTCGACTAAAATGGTGGGGACAAGTAAGGAGACGTTCGAACGGCAGATGGAGGCGGTGGGTGGGCTGAGACACCCTAATTTAGTCCCTCTCAGAGCTTATTTTCAGGCCAAAGAAGAAAGACTGCTAATTTACGATTACCACCCGAATGGCAGCCTCTTCTCCCTCGTCCACGGTAAAGAATACAGATCTCTCAGCTTCACCAGTCGTCCATGGCGGCCTGGGACGAAGTCAACAAGAGCGAAGCCATTACACTGGACTTCATGCCTGAAAATAGCAGAGGACGTAGCTCAAGGCCTTTCCTACATCCACCAAGCATGGCGGCTCGTGCATGGCAATCTCAAATCCTCCAACGTCCTCCTCGGCGCCGACTTCGAAGCTTGCATCACCGACTACTGCCTTTCCTCGCTCACCACCCATTTTCCGAACGAAGACTACTCAAAATCTAATCCATACAAAGCTCCCGAAACTCGGGTTGGCGTTAATGGCGGCCAAACATCCTCCAAATCTGACGTCTACGCTTTTGGAGTCTTACTCATCGAGCTTCTCACCGGGAAGGCTCCGTCCCAGCACCCATTCTCGGCTACAAACGAGGTAGCGGACTGGGTGAGATCGACGAGAGAAGATGAAGGGGAAGACGAGAGTAGAATGGCATTGCTGGTGGAGGTGGCTACAGCTTGTAGTTCAAGGTCGGCGGAGCAGCGGCCGACGATGTGGCAGGTGTTGAAGATGTTGCAGGAGATTAAGGAGAGTGTATTAATGGAGGATGGTGAAATGGAGGAAGATGCAAGGACAAAGTCGTCGCTGATCTAG 2034 51.03 MVKKKRSILQFLFHLLQGFLLCFSCCDLAVAASSLPSDGVALLAFGSKADVNKKLGFSMNNSLHFCHWRGVACIQHKVVRLVLRGLDLGGVFPPNSVTRLDQLRVLSLQNNSLTGSIPDLSRLFNLKSLFLDQNFFTGSFPPSVQSLRRLRTIDLSHNNLTGILPSWLIKQDRIYYLCLEWNFFNGSVPAFNQSSLQTFNVSGNDLTGAIPVTATLRRFGPTSFLLNPGLCGEVIHKECHPGQPFFRPATPQLAPPSPVVLGQSAEVHGVELAEPPQKTHKRMAVIIGFSSGAFVLLLSFLCFFTAVRKQRNRKDSKAIMASDATATAEAAAVMRIEEDNELQEKVKRVQGMQVGKSGNLVFCAGDVQLYSLDQLMRASAELLGRGTMGTTYKAVLDSRLIVSVKRLDSTKMVGTSKETFERQMEAVGGLRHPNLVPLRAYFQAKEERLLIYDYHPNGSLFSLVHGKEYRSLSFTSRPWRPGTKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGADFEACITDYCLSSLTTHFPNEDYSKSNPYKAPETRVGVNGGQTSSKSDVYAFGVLLIELLTGKAPSQHPFSATNEVADWVRSTREDEGEDESRMALLVEVATACSSRSAEQRPTMWQVLKMLQEIKESVLMEDGEMEEDARTKSSLI 677
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 28585387 28587602 + BLOR08416 Blo17g00870 73258
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00870 677 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 19 664 - -
Blo17g00870 677 Pfam Protein kinase domain 380 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00870 677 Pfam Leucine rich repeat 125 182 IPR001611 GO:0005515
Blo17g00870 677 SUPERFAMILY L domain-like 60 212 - -
Blo17g00870 677 ProSiteProfiles Protein kinase domain profile. 377 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00870 677 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Blo17g00870 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 664 - -
Blo17g00870 677 SUPERFAMILY Protein kinase-like (PK-like) 381 657 IPR011009 -
Blo17g00870 677 Gene3D Ribonuclease Inhibitor 193 243 IPR032675 -
Blo17g00870 677 Gene3D Transferase(Phosphotransferase) domain 1 456 668 - -
Blo17g00870 677 Gene3D Ribonuclease Inhibitor 36 192 IPR032675 -
Blo17g00870 677 Gene3D Phosphorylase Kinase; domain 1 347 454 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00752 Blo-Chr11:10204153 Blo17g00870 Blo-Chr17:28585387 1.39E-156 dispersed
Blo16g00952 Blo-Chr16:37796534 Blo17g00870 Blo-Chr17:28585387 7.03E-81 dispersed
Blo17g00870 Blo-Chr17:28585387 Blo14g00470 Blo-Chr14:5865975 1.47E-94 dispersed
Blo17g00870 Blo-Chr17:28585387 Blo16g00797 Blo-Chr16:33342916 1.08E-102 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84806 PF00069 Pkinase 7.40E-32 CL0016 Blo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00870 - - vvi:100250658 851.277