Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00877 ATGTCGAACTATGCCTTCTTAAACGACCAGCTTTCGAAGAAAACCTCCATTTTCGGTTTACGCTTGTGGGTAGTTCTGGGTATTTGCGTTGGGGCAGCCATTGTTTTTGTTCTCTTCCTCATATCGCTCTGGTTCACTTCCAGGCGAAATAACTCCTCAAAATCGAAGAACTCTCAAAGTCTCACCATCCCTAATGTCTCCAAGGAAATCCAGGAAATCCGGGTCGACCATTCTCGCAGCACCACCCACCACCCCGACCCGAAGATACAGCTTACGGCAAACCCAGACCCATTACCGGAGACGGAGTCGTTAGCCATAGTGGCTCAGCCGGAGGACGAAAATCCAGCGGGTTGGCGGCAAAGAATTCACATTGAGATTGGGAAGGACCACCGGATTTCGTACCCTGAGAGGGTAGGTGGGTCGTCCGGAGAGGCTAGGTCCGGCGACCAGGCGCTAAGTGCGGTGCCGGAGGTTTCGCATTTGGGTTGGGGACATTGGTATACTCTCAGAGAGCTCGAATCCTCTACCAATGGATTTGCAGACGAGAATGTTATTGGCGAAGGTGGGTATGGAATTGTTTACCGTGGAGTTTTTGAAGACAATACTTGTGTTGCTGTCAAGAATTTGCTCAATAACAGGGGACAAGCTGAGAAGGAGTTTAAGGTTGAAGTTGAAGCAATTGGACGCGTCAGGCACAAGAATTTAGTGAGATTGTTGGGTTATTGCGCTGAAGGAGCTCATAGGATGCTTGTTTATGAATATGTTGATAATGGAAACTTAGAACAATGGCTCCACGGAGATGTTGGACCGACCAGTCCTCTCACTTGGGACATTCGGATGAATATAATCCTAGGAACCGCAAAAGGATTGACGTATCTACACGAGGGGCTCGAGCCAAAGGTCGTTCATCGCGACATTAAGTCGAGCAACATTTTGCTCGACAAGCAGTGGAATCCGAAGGTCTCTGATTTTGGCTTAGCAAAGCTGCTCGGCTCGGAGAGAAGTTATGTCACTACCCGGGTGATGGGAACCTTCGGATATGTAGCCCCTGAATATGCTAGCACTGGAATGTTGAATGAAAGAAGCGATGTGTATAGTTTTGGGATTCTCATCATGGAGATCATCTCTGGACGGAATCCAGTCGACTATAGCCGTGCGCCTGGCGAGGTGAATCTGGTCGAGTGGCTTAAAACGATGGTTACGAATCGGAACGCAGAGGGAGTTCTCGATCGGAAGTTGCCGGAGAAGCCTTCTTCACGAGCACTCAAACGAGCCCTTTTAGTAGCTTTACGGTGTGTGGATCCAAACACACAAAAGCGGCCGAAAATGGGGCACGTTATACACATGCTCGAGGCAGATGAGTTTCCTTTCAGAGATGATCGGAGAGCGGGACGAGAACTAGGACGATCCCAGCGGGAAAATCTGAGGGATCAGTTGATGGACAAAAGAGTGAGCGAATCAGGAGATAGCAGTGGGTATGAAAGTGGAGCTCAGATTCATCGCCTTCTATGGAGAAAGCAAGAATCTGAAGACCAGTAA 1539 48.99 MSNYAFLNDQLSKKTSIFGLRLWVVLGICVGAAIVFVLFLISLWFTSRRNNSSKSKNSQSLTIPNVSKEIQEIRVDHSRSTTHHPDPKIQLTANPDPLPETESLAIVAQPEDENPAGWRQRIHIEIGKDHRISYPERVGGSSGEARSGDQALSAVPEVSHLGWGHWYTLRELESSTNGFADENVIGEGGYGIVYRGVFEDNTCVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPTSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRAPGEVNLVEWLKTMVTNRNAEGVLDRKLPEKPSSRALKRALLVALRCVDPNTQKRPKMGHVIHMLEADEFPFRDDRRAGRELGRSQRENLRDQLMDKRVSESGDSSGYESGAQIHRLLWRKQESEDQ 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 28915243 28917393 + BLOR08423 Blo17g00877 73265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00877 512 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524
Blo17g00877 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Blo17g00877 512 PANTHER OS01G0323000 PROTEIN 5 496 - -
Blo17g00877 512 PANTHER RECEPTOR-LIKE KINASE PLANT 5 496 - -
Blo17g00877 512 SUPERFAMILY Protein kinase-like (PK-like) 156 451 IPR011009 -
Blo17g00877 512 Gene3D Phosphorylase Kinase; domain 1 152 254 - -
Blo17g00877 512 Gene3D Transferase(Phosphotransferase) domain 1 255 507 - -
Blo17g00877 512 MobiDBLite consensus disorder prediction 465 488 - -
Blo17g00877 512 MobiDBLite consensus disorder prediction 75 95 - -
Blo17g00877 512 MobiDBLite consensus disorder prediction 465 498 - -
Blo17g00877 512 CDD STKc_IRAK 185 451 - -
Blo17g00877 512 SMART serkin_6 179 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00877 512 ProSiteProfiles Protein kinase domain profile. 179 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00877 512 Pfam Protein kinase domain 180 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00877 Blo18g00689 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00509 Blo-Chr4:4313096 Blo17g00877 Blo-Chr17:28915243 2.61E-162 dispersed
Blo08g00067 Blo-Chr8:651248 Blo17g00877 Blo-Chr17:28915243 1.09E-68 dispersed
Blo13g00554 Blo-Chr13:27519862 Blo17g00877 Blo-Chr17:28915243 0 dispersed
Blo17g00692 Blo-Chr17:18529350 Blo17g00877 Blo-Chr17:28915243 1.19E-172 dispersed
Blo17g00877 Blo-Chr17:28915243 Blo14g00496 Blo-Chr14:6599466 1.06E-91 dispersed
Blo02g00379 Blo-Chr2:4293998 Blo17g00877 Blo-Chr17:28915243 0 transposed
Blo17g00877 Blo-Chr17:28915243 Blo18g00689 Blo-Chr18:14827290 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84807 PF00069 Pkinase 3.70E-47 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00877 - - csv:101203008 854.358