Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00890 ATGAAACTGACTGCAACTGTAGAGGATCCTCGGCCTGAACAGCTCACCGGTGCATACTTTTTTTTTTGGGAAGAGGAAGTTCCATTTCCTACGCAAGGCTTCAATTTGGTTGAAGCCTCTCAAGTTTCTTCATCTTTTAGCCATTCTCGTTCTGTGATGAAAATTGAGAATACGAGGACTGTTCTCTTAGCTTGTCTTGATCACTCATTCATTCATTCACTCCTTTTACGCCGATCTTCTGCTATTTTCATTGGGGCACCATTTTGGAAATTGGTATTAAAACAGTTCGATGATTTACTTGTTAAGATATTAATTGCTGCGGCACTTGTTTCTTTTCTCTTGGCATTGATTAATGGAGAGACTGGATTAACTGCTTTTTTGGAGCCTTCTGTTATTTTGTTGATATTGGCTGCAAATGCAGCTGTTGGTGTAATCACAGAAAGTAACGCTGAAAAAGCTCTCGAGGAGCTACGGGCCTATCAAGCTGATATTGCAACTGTTATGCGAAATGGTTGCTTTTCCATACTCCCAGCAACAGATCTCGTTCCAGGTGATATCGTAGATGTTTCAGTGGGATGCAAAATTCCAGCTGATATGCGGATGATTGAAATGCTAAGTAATCAATTACGCGTAGATCAGGCAATTCTTACAGACGAACTGTCACTGGATGGAGCGGAAGACCTTGCCAATCAAAGTTCGTTGGCACCTGGGGTGTCTTTCGTTGGTTGCCGGATAGTCGACCTTGACTCCAACATCGAGAAAATTTCATTAGCTTTCCTTGGAGTGGTGAGTTGCCTTCTCTCCAATCAGGCAAAGCTGCATGGTGCTGATCGGTTCTACCGATTAGAGGAATGGCATGTCGTGGAGGAGTGTTGCACGAAGGAGCGTCCAAGAACAAGAATGGATATAGCTCTTTCCCATTGA 924 43.18 MKLTATVEDPRPEQLTGAYFFFWEEEVPFPTQGFNLVEASQVSSSFSHSRSVMKIENTRTVLLACLDHSFIHSLLLRRSSAIFIGAPFWKLVLKQFDDLLVKILIAAALVSFLLALINGETGLTAFLEPSVILLILAANAAVGVITESNAEKALEELRAYQADIATVMRNGCFSILPATDLVPGDIVDVSVGCKIPADMRMIEMLSNQLRVDQAILTDELSLDGAEDLANQSSLAPGVSFVGCRIVDLDSNIEKISLAFLGVVSCLLSNQAKLHGADRFYRLEEWHVVEECCTKERPRTRMDIALSH 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 29415863 29424177 + BLOR08436 Blo17g00890 73278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00890 307 Coils Coil 150 170 - -
Blo17g00890 307 Pfam E1-E2 ATPase 161 217 - -
Blo17g00890 307 Gene3D - 86 219 - -
Blo17g00890 307 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 163 IPR023298 -
Blo17g00890 307 SUPERFAMILY Calcium ATPase, transduction domain A 163 219 IPR008250 -
Blo17g00890 307 PANTHER BNACNNG37700D PROTEIN 85 219 - -
Blo17g00890 307 PANTHER CALCIUM-TRANSPORTING ATPASE 85 219 - -
Blo17g00890 307 Pfam Cation transporter/ATPase, N-terminus 86 111 IPR004014 -
Blo17g00890 307 Gene3D - 94 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00890 Blo-Chr17:29415863 Blo14g00140 Blo-Chr14:1007959 8.50E-35 dispersed
Blo17g00890 Blo-Chr17:29415863 Blo13g01094 Blo-Chr13:33078654 1.19E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00890 K05853 - vvi:100266003 231.106