Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00891 ATGGGTCGCGTGCTTCTCGATGTGAGCCGTGCACGCCACTACCAACAGGTCGAGCTTGCCTTCGTCTACAAGCGGCAACAATTGCCAATCACCTCTGACGACCGACGAAGGTTTTTGGTCAGTGATAGAGGCAACTCCGACTCCAATGGAGACTTTTCCGGCGAGGCAATTAGGGATTTAGATGGTCATAAGATTGCTTCTCAATCATGTGAGAGTTGCTCTGTAGAAAAAGAGCTTGAACCCACGGCTGCAGCAAATGCTGTATATCAAGACAAGACCAATATTCTTTTCTCGGGTACAGTTGTAGTTGCTGGTAGGGCAAGGGCTACTGTTGTAGGAGTTGGGGCTAATACTGCCATGGGCAGCATACGAGATTCCATGTTACAAACAGCAGATGAGGTGACACCATTGAAGAAGAAGTTAGATGAGTTTGGTACTTTTTTAGCCAAGGTCATTGCTGGAATATGTCTACTGGTTTGGATAGTAAACATTGGTCACTTTCGTGACCCTTCTCATGGAGGGTTCATACGTGGTGCAATTCATTACTTTAAGATTGCAGTTGCCCTTGCAGTTGCAGCAATACCTGAAGGACTTCCTGCTGTTGTTACAACGTGTTTGGCTCTTGGAACCAAACGAATGGCTCGGATGAATGCAATTGTAAGATCTTTGCCATCTGTGGAGACATTAGGCTGTACTACTGTAATATGCAGTGACAAAACTGGAACTTTGACTACCAATATGATATCTGTTTCCAAGCTATGTGTGGTTCATTCTGTTATGCGTGGGCCTGTAATTGATGAATACAGCATCAGCGGTACCACATATGCACCTGAAGGCATTATATATGACAGCACGGGGCTTCAGGTGGAATTTCCAGCTCAGTTGTCTTGTCTTCTACATATGGCTATGTGCTCAGCCCTGTGCAATGAGTCTGTATTGCAATATAATCCTGACAAGGGTAACTATGAAAAGATTGGCGAATCTACTGAAGTAGCCCTACGTGTTCTAGCAGAGAAGGTGGGTCTTCCTGGTTTTGACTCAATGCCTTCATCTTTGAATATGCTAAGCAAACGTGAGCGAGCTTCCTACTGCAACCACCATTGGGAAAGTCAATTCAAAAAGATTTCTATGTTGGACTTTACTCGTGATCGGAAAATGATGAGTGTTCTGTGTAGCAGAAATCAGCTACAGATATTATTTGCAAAAGGATTGGTGATTATGGATCCAAATTCAATCACTAATTATTGGAAATTTTATGTTTTGATTGATTCTAATGGTTAG 1281 43.33 MGRVLLDVSRARHYQQVELAFVYKRQQLPITSDDRRRFLVSDRGNSDSNGDFSGEAIRDLDGHKIASQSCESCSVEKELEPTAAANAVYQDKTNILFSGTVVVAGRARATVVGVGANTAMGSIRDSMLQTADEVTPLKKKLDEFGTFLAKVIAGICLLVWIVNIGHFRDPSHGGFIRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARMNAIVRSLPSVETLGCTTVICSDKTGTLTTNMISVSKLCVVHSVMRGPVIDEYSISGTTYAPEGIIYDSTGLQVEFPAQLSCLLHMAMCSALCNESVLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFDSMPSSLNMLSKRERASYCNHHWESQFKKISMLDFTRDRKMMSVLCSRNQLQILFAKGLVIMDPNSITNYWKFYVLIDSNG 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 29424966 29437200 + BLOR08437 Blo17g00891 73279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00891 426 Gene3D - 246 403 IPR023299 GO:0000166
Blo17g00891 426 Gene3D - 129 232 - -
Blo17g00891 426 PANTHER CALCIUM-TRANSPORTING ATPASE 70 409 - -
Blo17g00891 426 SUPERFAMILY Calcium ATPase, transmembrane domain M 128 394 IPR023298 -
Blo17g00891 426 Gene3D - 71 128 - -
Blo17g00891 426 Gene3D - 233 245 IPR023214 -
Blo17g00891 426 Pfam E1-E2 ATPase 75 215 - -
Blo17g00891 426 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 243 403 IPR023299 GO:0000166
Blo17g00891 426 SUPERFAMILY Calcium ATPase, transduction domain A 71 126 IPR008250 -
Blo17g00891 426 ProSitePatterns E1-E2 ATPases phosphorylation site. 238 244 IPR018303 -
Blo17g00891 426 PANTHER CALCIUM-TRANSPORTING ATPASE 70 409 - -
Blo17g00891 426 Pfam Cation transport ATPase (P-type) 306 403 - -
Blo17g00891 426 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 122 257 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00891 Blo-Chr17:29424966 Blo14g00140 Blo-Chr14:1007959 2.03E-61 dispersed
Blo17g00891 Blo-Chr17:29424966 Blo13g01094 Blo-Chr13:33078654 5.55E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00891 K05853 - mnt:21387511 580.096