Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00026 ATGTATGCAACAGTAGATTTAGACAAAGCAAGAGTCGGCCGCACCAGAGTGATCGAAAACCAACCTTCAAGCCCTCAATGGAACGAGTCCTTCCACATATACTGTGCGCACTACATCTCGTATGTTATATTTACAGTAAAGGAGGATGATCCAATTGGAGCAACACTGATTGGAAGAGCTTATGTACCTGTGGAGGATATCATAAAAGGATATGTAGTAGACAGATGGGTAGAGCTTTTGGACGAAGAGCATATTCCAATTCATGGTGGATCTAAAATTCATGTGAAGCTTCAATTTTTTGACATAAAAGAAGACAGTAATTGGTCTCAGGGAATAAAAACAACACCCCTATTTGGGGGAGTTCCTTACACTTTCTTCAATCAAAGATCTGGCTGCAGAGTTTCTCTTTACCAAGATGCACATGTCTCTGATAATTTCATCGACCACCTCGAAAGGTCTGGTGGATACTATCCGGAGCTTCGTAGGTGCTGGGAGGACATCTTCGATGCGCTAATGAACGCGAAACACTTGATTTACATAACTGGATGGTCTGTGTACACTAAAATCACATTGGTAAGAGATCCAAGAAGACCAAAACCAGGAGGTGATATGACTCTTGGGGAGCTGCTGATAAAGAAGGCCAATGATGGTGTGACTGTCTTGATGCTTGTTTGGGATGATAGAACCTCCATTCCTGAGTTTAAAAAGGTTGGTAAAATGGAGACACATGATCAAGAAACTGAACAGTTCTTTCGAAACACGAAAGTCCATTGTTTTCTGTGCCCTCGTAATCCCGATGATGGTTTGAGCATAGTTCAGGGATTTGAAATTACTACATTGTTCACTCATCATCAGAAAACAGTTGTGGTCGATGCAGAAGTATCTGGTGAAGAATTTGGAAAAAGGAGAATTGTGAGCTTTGTTGGGGGAATCGATCTGTGTGACGGTAGATATGATACGCAAGAGCATCATTTATTTTCAACCTTAAGCTCCACCCACCGTGATGATTTTCATCAACCCAACTTTTCAGGCTCTTCAATTCAGAAAGGTGGTCCTAGGGAGCCCTGGCACGACATCCATTGCTGCCTGGAAGGGCCTGTGGCTTGGGATGTTCTTTACAATTTTGAGCAGAGGTGGCTGAAGCAAATTGGGGATAAGTTCTTGATTCCATTATGGAAACTTGATGAAATTATTGTTCGTCCATCACCCATTTTATTAGCTGATGATCCTGAAGTGTGGAATGTTCAGATATTTCGATCCATTGATGGTGGTGCAGCATTTGGCTTCCCTGAAAATCCGCCTGAAGCAGCTTCAGTTGGCCTCGTGAGTGGAAAGGACAACATCATTGACCGAAGCATTCAAGATGCTTACATCAATGCTATTCGTCGAGCCAAAAACTTTGTCTACATAGAAAACCAATATTTTCTCGGCAGCTCATTTGGATGGAAATCCAGTAATATCAAGGTTGAAGACATAGGAGCTCTGCATCTTATACCAAAGGAGCTTTCCCTCAAAATTGTCAGTAAAATTGAAGCAGGAGAGAGATTTACTGCCTATGTTGTGATCCCAATGTGGCCAGAAGGCATTCCAGAGAGCGGCCCCGTTCAAGCAATGTTAGATTGGCAAAGGAGAACGATGGAGATGATGTATGCCGACATCAGTGAAGCTCTTCGAAGGAAAGGTTGGAATGCAAACCCAAGAGACTTCTTGACATTCTTTTGTCTTGGAAATAGGGAATTAATAAACTCGGGAGAATATGTTCCAACCGAAAAGCCTGAGCCCAACTCCGACTACATTAGAGCTCAAGAGGCTAGACGTTTCATGATTTACGTCCATGCGAAAATGATGATAGTCGACGATGAGTACATAATAATCGGATCAGCCAACATCAACGAAAGATCAATGGGAGGAGGACGAGACTCGGAGATTTGCATGGGGGCTTTTCAGCCGCATCACTTGGTGGGGAGTGAGCAGGGAGCAAGAGGTCAGATATTCAAGTTCAGAATGTCGTTGTGGATGGAGCATCTGGGACTAACCCACACCTCGTTTCGACACCCGGAAAGCCTGAGCTGTGTTCATTTAGTGAACGCCATTGCTCAAGAGAGTTGGGAGGTCTACTCGAGCAACACGTCTGCGAAGAATCTCCCATGTCACCTGCTTCGTTACCCCATTGAATTGGCATTTCCGGAACCAAAAGTGGATGGAGGGGGTGGGTGTCTACTGTCTCCTCTCCTCGAGTTTCTGCGGGTAAACTTATTGGCTAGGAGTGATTCCTTGTCGGGAGAACTTGCTTGTATCTTGATGGGGAGTGTGATGTGTAGACCTGCTGGCCTTCGCCATGGCTCATTTTTGCTTGAAGCTTTAGGGAATTCTTATGATTCCCTTTTTTGTTGTCTGATTTCGAGCACAAATGGACCAGAGAACAAGAAAGAAGATGCAATATTTATAACAGGAGCAACAACTGCATGA 2469 43.9 MYATVDLDKARVGRTRVIENQPSSPQWNESFHIYCAHYISYVIFTVKEDDPIGATLIGRAYVPVEDIIKGYVVDRWVELLDEEHIPIHGGSKIHVKLQFFDIKEDSNWSQGIKTTPLFGGVPYTFFNQRSGCRVSLYQDAHVSDNFIDHLERSGGYYPELRRCWEDIFDALMNAKHLIYITGWSVYTKITLVRDPRRPKPGGDMTLGELLIKKANDGVTVLMLVWDDRTSIPEFKKVGKMETHDQETEQFFRNTKVHCFLCPRNPDDGLSIVQGFEITTLFTHHQKTVVVDAEVSGEEFGKRRIVSFVGGIDLCDGRYDTQEHHLFSTLSSTHRDDFHQPNFSGSSIQKGGPREPWHDIHCCLEGPVAWDVLYNFEQRWLKQIGDKFLIPLWKLDEIIVRPSPILLADDPEVWNVQIFRSIDGGAAFGFPENPPEAASVGLVSGKDNIIDRSIQDAYINAIRRAKNFVYIENQYFLGSSFGWKSSNIKVEDIGALHLIPKELSLKIVSKIEAGERFTAYVVIPMWPEGIPESGPVQAMLDWQRRTMEMMYADISEALRRKGWNANPRDFLTFFCLGNRELINSGEYVPTEKPEPNSDYIRAQEARRFMIYVHAKMMIVDDEYIIIGSANINERSMGGGRDSEICMGAFQPHHLVGSEQGARGQIFKFRMSLWMEHLGLTHTSFRHPESLSCVHLVNAIAQESWEVYSSNTSAKNLPCHLLRYPIELAFPEPKVDGGGGCLLSPLLEFLRVNLLARSDSLSGELACILMGSVMCRPAGLRHGSFLLEALGNSYDSLFCCLISSTNGPENKKEDAIFITGATTA 822
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 198175 202234 - BLOR08514 Blo18g00026 73330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00026 822 CDD C2_plant_PLD 1 100 - -
Blo18g00026 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 607 634 IPR001736 GO:0003824
Blo18g00026 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 279 317 IPR001736 GO:0003824
Blo18g00026 822 SUPERFAMILY Phospholipase D/nuclease 115 395 - -
Blo18g00026 822 Pfam Phospholipase D Active site motif 280 317 IPR001736 GO:0003824
Blo18g00026 822 Pfam Phospholipase D Active site motif 608 634 IPR001736 GO:0003824
Blo18g00026 822 Gene3D Endonuclease Chain A 148 389 - -
Blo18g00026 822 PIRSF PLD_plant 1 740 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Blo18g00026 822 Gene3D Endonuclease Chain A 426 650 - -
Blo18g00026 822 SUPERFAMILY Phospholipase D/nuclease 441 691 - -
Blo18g00026 822 PANTHER PHOSPHOLIPASE D ALPHA 3 1 728 - -
Blo18g00026 822 SMART C2_3c 1 76 IPR000008 -
Blo18g00026 822 SMART pld_4 607 634 IPR001736 GO:0003824
Blo18g00026 822 SMART pld_4 279 317 IPR001736 GO:0003824
Blo18g00026 822 Gene3D C2 domain 1 113 IPR035892 -
Blo18g00026 822 Pfam Phospholipase D C terminal 681 726 IPR024632 -
Blo18g00026 822 Pfam C2 domain 2 79 IPR000008 -
Blo18g00026 822 PANTHER PHOSPHOLIPASE D 1 728 IPR015679 -
Blo18g00026 822 ProSiteProfiles C2 domain profile. 1 77 IPR000008 -
Blo18g00026 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 101 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00662 Blo-Chr6:29610978 Blo18g00026 Blo-Chr18:198175 0 dispersed
Blo08g00396 Blo-Chr8:7090786 Blo18g00026 Blo-Chr18:198175 0 dispersed
Blo17g00727 Blo-Chr17:22093559 Blo18g00026 Blo-Chr18:198175 0 dispersed
Blo18g00026 Blo-Chr18:198175 Blo05g00130 Blo-Chr5:1211203 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00026 K01115 - twl:119996426 1114.37