Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo18g00028 | ATGGGAGAGACGAGGGACGCTGAATATGAGGACGAGCTCGTCGACTATGAAGATGAGGAGTACAAGGCATCCGACGCCGTTGGTGCCAAAGTCAATGGCGAAGCAGCGAAGAAGGGTTATGTCGGCATTCATAGCTCAGGATTCAGAGACTTTCTTTTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGAAGAAAATATATGGGCCAGAATGGTTGTAGTTCTGCTGTTGTTTTCCCACTTTTCTTTATATTGCAACATGAATGTATTCCCCAAGCTATTCTGGGTATGGATGTCCTTTGTCAAGCTAAATCTGGGATGGGAAAAACTGCTGTTTTCGTACTATCCACCCTGCAGCAAATTGACCCTGTAGCGGGTCAAGTTTCTGCCCTGGTTCTTTGTCATACAAGAGAGCTAGCATACCAGATATGCCATGAGTTTGAGAGGTTCAGTTCTTACTTGTCTGATCTCAAAGTGTCGGTATTCTATGGTGGTGTCAATATTAGAATTCACAAAGATCTACTGAAGAATGAATGCCCTCATATTGTTGTTGGAACTCCTGGAAGAATTTTGGCATTGGCAAGAGATAAGGATCTTTCTCTAAAGAATGTTAGGCATTTTATCTTGGATGAATGTGACAAGATGCTTGAATCACTTGACATGAGAAGGGATGTGCAGGAGATTTTCAAGATGACGCCTCACGATAAGCAAGTTATGATGTTTTCTGCAACACTCAGCAAAGAAATTCGTCCGGTTTGCCATAAATTTATGCAAGATGTGTTTAAAATAGAATCGAGCGACTGTTTTCTTGTGGGAGTTCCTGGTGTGTTGCTCCTTGAGAACATTGGCTAA | 855 | 42.69 | MGETRDAEYEDELVDYEDEEYKASDAVGAKVNGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGRKYMGQNGCSSAVVFPLFFILQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSSYLSDLKVSVFYGGVNIRIHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCHKFMQDVFKIESSDCFLVGVPGVLLLENIG | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 211468 | 213447 | + | BLOR08516 | Blo18g00028 | 73332 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo18g00028 | 284 | CDD | DEADc_DDX39 | 45 | 265 | - | - | |
Blo18g00028 | 284 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE ISOFORM X1 | 27 | 266 | - | - | |
Blo18g00028 | 284 | Gene3D | - | 34 | 265 | IPR027417 | - | |
Blo18g00028 | 284 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 91 | 264 | IPR014001 | - | |
Blo18g00028 | 284 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 27 | 266 | - | - | |
Blo18g00028 | 284 | SMART | ultradead3 | 79 | 275 | IPR014001 | - | |
Blo18g00028 | 284 | Pfam | DEAD/DEAH box helicase | 86 | 250 | IPR011545 | GO:0003676|GO:0005524 | |
Blo18g00028 | 284 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 45 | 265 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo12g01079 | Blo-Chr12:28496511 | Blo18g00028 | Blo-Chr18:211468 | 1.33E-148 | dispersed | |
Blo18g00028 | Blo-Chr18:211468 | Blo08g00257 | Blo-Chr8:3271493 | 8.02E-30 | dispersed | |
Blo01g01383 | Blo-Chr1:52119211 | Blo18g00028 | Blo-Chr18:211468 | 3.71E-111 | wgd | |
Blo17g00022 | Blo-Chr17:127366 | Blo18g00028 | Blo-Chr18:211468 | 1.69E-173 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo18g00028 | K12812 | - | csv:101217346 | 437.573 |