Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00035 ATGATCGTCGAATTAAAAAGGAAAGGATGTGGATGCAATGTCAACCATCGGATCAAAGGAGAAGATGCTCATGTGGAAATAAAGATTCCTTTCGAGAGAATGATTGACCGTTGGATCGACGAAGTGACTGTGCGGTTTTGTCTAAGGGTTTTTCAAAAAGGCAGAGCAACCGAAGAGGATTTCTTCCATGACTCATTCAAGGTCAAGCACAGAAAAATGACAAAGAAGAAGAACCCTTTGGTTTTTATGGATGTATCAATTGACGGTGATCCAATTGAGAGAATGATTTTTGAGCTTTTCTGTGATGTCGCCCCAAAGACAGCAGAAAACTTCCGTGCTCTTTGTACGGGAGAGAAAGGAATTGGCCCTAAAACTGGAAAACCGCTGCACTACAAGGGATCTTTCTTCCATCGTATTGTCAAAGGCTCTATGGCACAGGGAGGAGATTTTGTCAAAAGAGATGGAACTGTGGGAGAAAGCATATATGGAACGAAGTTTCCAGATGAATTACCTCGACTAAAGCATGACGAAGCAGGTCTTCTATCCATGTTGGTGGCTGGCCGTGACAATTTGGGTTCTCATTTTCTTGTCACCTTTAAAGCTTGTCACAATCTTGACAGGAAATGTGTGGTATTTGGAAAGCTGGTTCAAGGATTTGATGTTTTAAAAAAGATTGAAGTTGTTGGTGACGAAGATGGTTGTCCAACTGTGACAGTGAAAATCATTAATTGTGGTGATTATACTGAAGATAAAAAGAAAAACTGCAAAAGCAAAGCAAGGAAGGATGCGTCTTCTGAAGATGATGAAGTAAATAGAAAGAGAAAGCAGAAGAAATCATCTAGAGATAAGAGGAGGAGGAGAAAATACTCCACATCTGAATCAGAGAGTTCATCTGACACTGAGATTGAATCCTCTGAGTCCGATAGTGATTCAGATTCAGATTTTTCATTGTCATCAGATGATACTCTTTCAAGTGATTATAGGCCTAAGAAGCGAAAGAGGTCTTCTAAGAAAGACAGATACCGGCATGGTAGAAGAAAGGATAAAAAACGTGATAAAAGGAGGAGGCGGCGTGACAAGCGATCCAAGAGGAGATCCAAAAGGGCATTGGATAGTCATACAGATTCTGAGAGTGAGAACAAAGGTGAAAGTAGGTTAGGTAGTGATGGTGTAGATGAGAAGTGTGAAGAATCCCCAGTCAAAGCTCGTAAGTCTTCCTCCCAGGATGGTGTATCCCCAGTCCTAAATGTTCGTCATAAGAGGAGAGATGGAGCAGATTCAGTTGTAAATGATGATGGGAGAACTCCTCTGGAGAATGGAGAGCAAAGGAGCAATGGCATTACTGCATTGGATTCTAGCTCAGACAGAAACATGGAAAGACAACCTGACGTAGTAGATGATCATCCTGGAAAATCTAGCAGGAGTCGAAGCTTGAGTCCTAAGAGGACCATGAGTAAAAGTATGAGTATTAGTCCCAGGAAGAGTTTCAGCAAAAGCCCAAGTGTGAGTCCAAAACAAAGTATGAGCAGGAGTAGGAGTGTGAGTAGAAGTCCACATGTGCCACTGAGAAACAGGAATGTGAGCAGAAGCCCTATTAGGAGCGATAGCAGTAAGAGCCCTGTCAGAAGTATTAGCAGAAGTCCTTCTGAGGATAGGAAAGGTCGAAGCGGTCGTGGGAGCCCAGCAAGAGCTAGGTCTTTAAAAAGCAATAGCAGGAGCCCTGCATATCTCACGAGTCCACCTAGAAAAGTTGTGAGAAAATCGGTTAGCAGAAGCCCAGTTAGAAGAAGTTTAAGTGGAAGTCCAGTGAGATCTGCTCGAAAGAGTGTCAGCAGAAGCTCAGGCAGGTTACCGCCTTCAAGAAAAAGTTTTAGCCGAAGTCCGGTCAGACGAAGGAGCTATTCAAGGAGCCCCAGTCCTGTTCGCAGGCCAAGATCACCCCCATCTGATCGTGGACGAAGTGTGTCAAGAAGTGTGTCTCCAGATGGATCACCCAAGCGCGTCAGGAGGGGAAGGGGTTTCAGTCAACGGTATTCATATGCGCGGAGATATAGAACCCCCTCGGTATCTCCAGTGAGGTCCTATCGTTACAGTGATATAGACGCAGAAGAAGCAGGTCACCTACTGTATCACGGAGTCCTCGATACAGAAAGCGTCGTTATAGCCGGAGTTGCAGTCCAATTCGAAGCCGCACCCCAGTTGAGACTTCTAGGTATCGCCCGTCTCCTCGGGTTGAGCGGCGGAGATCACCTTCAAAAAGCAAGAGCCCATCACAATCAAAGTCCTCACTTGACTCCCCGTCCCCCAGGCGCACAAGCAAAATTAAGTCAGTGTCAAGGTCAAGGTCAAGGTCAAGGTCATCATCTTCAAGAAGCCCAGATGGGAAGAAGGGCTTGGTTTCCTATGGCGATGGTTCCCCCGACTCTGCGGACAGGATTTGTCATAGACAGCGTGAATATGGTAGTTTTTGCTGTCGTGTGTTGGAGTTCCATGGCCGCATGGCAGTTTCCGGTGCAATTGGGTTGA 2526 45.29 MIVELKRKGCGCNVNHRIKGEDAHVEIKIPFERMIDRWIDEVTVRFCLRVFQKGRATEEDFFHDSFKVKHRKMTKKKNPLVFMDVSIDGDPIERMIFELFCDVAPKTAENFRALCTGEKGIGPKTGKPLHYKGSFFHRIVKGSMAQGGDFVKRDGTVGESIYGTKFPDELPRLKHDEAGLLSMLVAGRDNLGSHFLVTFKACHNLDRKCVVFGKLVQGFDVLKKIEVVGDEDGCPTVTVKIINCGDYTEDKKKNCKSKARKDASSEDDEVNRKRKQKKSSRDKRRRRKYSTSESESSSDTEIESSESDSDSDSDFSLSSDDTLSSDYRPKKRKRSSKKDRYRHGRRKDKKRDKRRRRRDKRSKRRSKRALDSHTDSESENKGESRLGSDGVDEKCEESPVKARKSSSQDGVSPVLNVRHKRRDGADSVVNDDGRTPLENGEQRSNGITALDSSSDRNMERQPDVVDDHPGKSSRSRSLSPKRTMSKSMSISPRKSFSKSPSVSPKQSMSRSRSVSRSPHVPLRNRNVSRSPIRSDSSKSPVRSISRSPSEDRKGRSGRGSPARARSLKSNSRSPAYLTSPPRKVVRKSVSRSPVRRSLSGSPVRSARKSVSRSSGRLPPSRKSFSRSPVRRRSYSRSPSPVRRPRSPPSDRGRSVSRSVSPDGSPKRVRRGRGFSQRYSYARRYRTPSVSPVRSYRYSDIDAEEAGHLLYHGVLDTESVVIAGVAVQFEAAPQLRLLGIARLLGLSGGDHLQKARAHHNQSPHLTPRPPGAQAKLSQCQGQGQGQGHHLQEAQMGRRAWFPMAMVPPTLRTGFVIDSVNMVVFAVVCWSSMAAWQFPVQLG 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 229690 239721 - BLOR08523 Blo18g00035 73339

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00035 841 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 73 548 - -
Blo18g00035 841 MobiDBLite consensus disorder prediction 592 621 - -
Blo18g00035 841 MobiDBLite consensus disorder prediction 415 429 - -
Blo18g00035 841 SUPERFAMILY Cyclophilin-like 72 248 IPR029000 -
Blo18g00035 841 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 82 246 IPR002130 GO:0000413|GO:0003755
Blo18g00035 841 MobiDBLite consensus disorder prediction 368 403 - -
Blo18g00035 841 MobiDBLite consensus disorder prediction 456 474 - -
Blo18g00035 841 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 83 245 IPR002130 GO:0000413|GO:0003755
Blo18g00035 841 MobiDBLite consensus disorder prediction 253 679 - -
Blo18g00035 841 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 73 548 - -
Blo18g00035 841 MobiDBLite consensus disorder prediction 253 275 - -
Blo18g00035 841 MobiDBLite consensus disorder prediction 299 315 - -
Blo18g00035 841 MobiDBLite consensus disorder prediction 439 455 - -
Blo18g00035 841 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 148 IPR002130 GO:0000413|GO:0003755
Blo18g00035 841 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 194 IPR002130 GO:0000413|GO:0003755
Blo18g00035 841 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 207 222 IPR002130 GO:0000413|GO:0003755
Blo18g00035 841 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 114 IPR002130 GO:0000413|GO:0003755
Blo18g00035 841 MobiDBLite consensus disorder prediction 753 774 - -
Blo18g00035 841 Gene3D - 65 247 IPR029000 -
Blo18g00035 841 MobiDBLite consensus disorder prediction 476 544 - -
Blo18g00035 841 MobiDBLite consensus disorder prediction 330 367 - -
Blo18g00035 841 MobiDBLite consensus disorder prediction 563 577 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00035 K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8] - csv:101210345 517.694
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo17g00026 Blo18g00035 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00569 Blo-Chr13:27805002 Blo18g00035 Blo-Chr18:229690 4.23E-50 dispersed
Blo18g00035 Blo-Chr18:229690 Blo11g00446 Blo-Chr11:3949713 1.92E-51 dispersed
Blo05g00381 Blo-Chr5:4665013 Blo18g00035 Blo-Chr18:229690 5.97E-11 transposed
Blo17g00026 Blo-Chr17:138784 Blo18g00035 Blo-Chr18:229690 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g446 . . . . Bpe02g01238 . . . Cmo05g00413 Cmo12g00276 . Cma05g00402 . Car12g00307 . Cpe07g00284 . Bhi04g00994 . . . Hepe10g0270 . . . . . . . . . Cone4ag1806 Cone7ag1714 . . . . . Cme03g01642 Blo17g00026 Blo18g00035 Bda01g00993 . . . Bma01g01285 Bma02g00030 . . . . Cma12g00325 . Car05g00336 Cpe11g00342 . . . . . . . . Cla08g01312 Cam08g1772 Cec08g1354 Cco08g1474 Clacu08g1468 . Cre08g1255 Lsi08g01176 . Chy03g01144 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000569 2 5 4 4 2 3 5 3 3 3 3 3 5 3 2 5 3 6 6 3 3 4 3 3 1 2 2 8 4 2 105
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00035 Blo_Chr18 FPKM 3.736984 4.017435 3.494528 3.792934 20.19186 23.926748 17.542938 1.450688 2.377952 2.168508