Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo18g00040 | ATGGAAGGCAGTAAAGACGGAAATGTTGACAGTGGGAGCAGCTCAAAAGAGGGTCTGCCTCCCAATCCTCTTGCGGCGGCCTATCGCCAATGCCTTACTACTGATCGTATTCCGCGGCCCTTTAAGAAATCGCTCGTACGCCACCAGTCGCTCATGAAGACCAATGCACTCGGGGAAACTGTATTTAACAACGATAGCCAAGATTCTAACTTCATTCCAATGGTTCGGTCTGGAGCGTGCGCTGACATTGGGTTTCGTAGCAGCATGGAAGATGTACATGTTTGCATCGACAAATTTATAAGTGCTGACCGGCTTGAAAATTCTACCGATGGGCCTGGTGCTTTCTATGGGGTGTTTGATGGGCATGGAGGAAAGCATGCTGCAGACTTTGCTTGTCACCATTTGCCTAAATTCATAGTCGAGGACGAAGATTTCCCGGAGGATGTTGAGAAGGTTGTCGCTTCAGCATTTCTTCAAACTGATACCGCCTTCGAGAAAGCTTGTTCCTCCAACGCTGTCCTTGCATCTGGCACCACAGCTTTGGCTGCTCTTGTACTTGGAAGGTCATTGGTGGTGGCAAATGTAGGAGACTGTCGAGCGGTTCTCTGTCGTCGTGGCAAGGCCATTGAAATGTCAAGGGATCACAAGCCCATTTGCATCACAGAGAAGAACCGGATCGAGGCAGCTGGAGGGTATGTTTACGATGGTTATCTCAACGGACAACTCAACGTCGCTCGAGCCCTGGGAGACTGGCACATGGAAGGAATGAAGGGTCGAGATGGTGGACCCCTCAGTGCCGAGCCGGAGCTCATGTCTACGAAATTAACCGAGGAAGATGAGTTTCTGATAATAGGATGTGACGGGATATGGGATGTATTTAGGAGCCAAAATGCTGTCGATTTTGCCAGACGGAAGCTTCAAGAGCATAACGACCCGGCCTTGTGTAGCAAGGATTTGATCGAGGAGGCTTTGAAGAGAAAAAGCGGGGATAATTTATCCGTGGTTGTGGTCTGTTTCCAATCTCCGCCTCCACCGAATTTGGTTACGCCTCGGACGAGAATGCAGAGGAGCTTTTCTGCTGAAGGATTGAGGGAGTTGCAAAGCTTTCTTGACAGCATGGAAGAAGTAACTCGTTGA | 1137 | 49.52 | MEGSKDGNVDSGSSSKEGLPPNPLAAAYRQCLTTDRIPRPFKKSLVRHQSLMKTNALGETVFNNDSQDSNFIPMVRSGACADIGFRSSMEDVHVCIDKFISADRLENSTDGPGAFYGVFDGHGGKHAADFACHHLPKFIVEDEDFPEDVEKVVASAFLQTDTAFEKACSSNAVLASGTTALAALVLGRSLVVANVGDCRAVLCRRGKAIEMSRDHKPICITEKNRIEAAGGYVYDGYLNGQLNVARALGDWHMEGMKGRDGGPLSAEPELMSTKLTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPALCSKDLIEEALKRKSGDNLSVVVVCFQSPPPPNLVTPRTRMQRSFSAEGLRELQSFLDSMEEVTR | 378 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 265747 | 267900 | - | BLOR08528 | Blo18g00040 | 73344 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo18g00040 | 378 | Pfam | Protein phosphatase 2C | 78 | 331 | IPR001932 | - | |
| Blo18g00040 | 378 | ProSitePatterns | PPM-type phosphatase domain signature. | 115 | 123 | IPR000222 | GO:0043169 | |
| Blo18g00040 | 378 | SUPERFAMILY | PP2C-like | 69 | 342 | IPR036457 | - | |
| Blo18g00040 | 378 | Gene3D | - | 56 | 342 | IPR036457 | - | |
| Blo18g00040 | 378 | ProSiteProfiles | PPM-type phosphatase domain profile. | 76 | 339 | IPR001932 | - | |
| Blo18g00040 | 378 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Blo18g00040 | 378 | CDD | PP2Cc | 75 | 339 | IPR001932 | - | |
| Blo18g00040 | 378 | PANTHER | PROTEIN PHOSPHATASE 2C | 63 | 361 | IPR015655 | GO:0004722|GO:0006470 | |
| Blo18g00040 | 378 | SMART | PP2C_4 | 66 | 337 | IPR001932 | - | |
| Blo18g00040 | 378 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 63 | 361 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo12g01046 | Blo18g00040 | CCT | |
| Blo12g01046 | Blo18g00040 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g00591 | Blo-Chr1:6502672 | Blo18g00040 | Blo-Chr18:265747 | 2.56E-115 | dispersed | |
| Blo01g01641 | Blo-Chr1:56219899 | Blo18g00040 | Blo-Chr18:265747 | 2.20E-119 | dispersed | |
| Blo12g00848 | Blo-Chr12:26748581 | Blo18g00040 | Blo-Chr18:265747 | 4.99E-116 | dispersed | |
| Blo12g01046 | Blo-Chr12:28294284 | Blo18g00040 | Blo-Chr18:265747 | 1.18E-41 | dispersed | |
| Blo15g00061 | Blo-Chr15:489600 | Blo18g00040 | Blo-Chr18:265747 | 1.08E-36 | dispersed | |
| Blo18g00040 | Blo-Chr18:265747 | Blo12g01039 | Blo-Chr12:28238832 | 7.21E-46 | dispersed | |
| Blo05g00165 | Blo-Chr5:1492491 | Blo18g00040 | Blo-Chr18:265747 | 6.63E-42 | transposed | |
| Blo17g00030 | Blo-Chr17:170237 | Blo18g00040 | Blo-Chr18:265747 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo18g00040 | K14803 | - | zju:107421256 | 575.474 |