Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00040 ATGGAAGGCAGTAAAGACGGAAATGTTGACAGTGGGAGCAGCTCAAAAGAGGGTCTGCCTCCCAATCCTCTTGCGGCGGCCTATCGCCAATGCCTTACTACTGATCGTATTCCGCGGCCCTTTAAGAAATCGCTCGTACGCCACCAGTCGCTCATGAAGACCAATGCACTCGGGGAAACTGTATTTAACAACGATAGCCAAGATTCTAACTTCATTCCAATGGTTCGGTCTGGAGCGTGCGCTGACATTGGGTTTCGTAGCAGCATGGAAGATGTACATGTTTGCATCGACAAATTTATAAGTGCTGACCGGCTTGAAAATTCTACCGATGGGCCTGGTGCTTTCTATGGGGTGTTTGATGGGCATGGAGGAAAGCATGCTGCAGACTTTGCTTGTCACCATTTGCCTAAATTCATAGTCGAGGACGAAGATTTCCCGGAGGATGTTGAGAAGGTTGTCGCTTCAGCATTTCTTCAAACTGATACCGCCTTCGAGAAAGCTTGTTCCTCCAACGCTGTCCTTGCATCTGGCACCACAGCTTTGGCTGCTCTTGTACTTGGAAGGTCATTGGTGGTGGCAAATGTAGGAGACTGTCGAGCGGTTCTCTGTCGTCGTGGCAAGGCCATTGAAATGTCAAGGGATCACAAGCCCATTTGCATCACAGAGAAGAACCGGATCGAGGCAGCTGGAGGGTATGTTTACGATGGTTATCTCAACGGACAACTCAACGTCGCTCGAGCCCTGGGAGACTGGCACATGGAAGGAATGAAGGGTCGAGATGGTGGACCCCTCAGTGCCGAGCCGGAGCTCATGTCTACGAAATTAACCGAGGAAGATGAGTTTCTGATAATAGGATGTGACGGGATATGGGATGTATTTAGGAGCCAAAATGCTGTCGATTTTGCCAGACGGAAGCTTCAAGAGCATAACGACCCGGCCTTGTGTAGCAAGGATTTGATCGAGGAGGCTTTGAAGAGAAAAAGCGGGGATAATTTATCCGTGGTTGTGGTCTGTTTCCAATCTCCGCCTCCACCGAATTTGGTTACGCCTCGGACGAGAATGCAGAGGAGCTTTTCTGCTGAAGGATTGAGGGAGTTGCAAAGCTTTCTTGACAGCATGGAAGAAGTAACTCGTTGA 1137 49.52 MEGSKDGNVDSGSSSKEGLPPNPLAAAYRQCLTTDRIPRPFKKSLVRHQSLMKTNALGETVFNNDSQDSNFIPMVRSGACADIGFRSSMEDVHVCIDKFISADRLENSTDGPGAFYGVFDGHGGKHAADFACHHLPKFIVEDEDFPEDVEKVVASAFLQTDTAFEKACSSNAVLASGTTALAALVLGRSLVVANVGDCRAVLCRRGKAIEMSRDHKPICITEKNRIEAAGGYVYDGYLNGQLNVARALGDWHMEGMKGRDGGPLSAEPELMSTKLTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPALCSKDLIEEALKRKSGDNLSVVVVCFQSPPPPNLVTPRTRMQRSFSAEGLRELQSFLDSMEEVTR 378
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 265747 267900 - BLOR08528 Blo18g00040 73344
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00040 378 Pfam Protein phosphatase 2C 78 331 IPR001932 -
Blo18g00040 378 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Blo18g00040 378 SUPERFAMILY PP2C-like 69 342 IPR036457 -
Blo18g00040 378 Gene3D - 56 342 IPR036457 -
Blo18g00040 378 ProSiteProfiles PPM-type phosphatase domain profile. 76 339 IPR001932 -
Blo18g00040 378 MobiDBLite consensus disorder prediction 1 22 - -
Blo18g00040 378 CDD PP2Cc 75 339 IPR001932 -
Blo18g00040 378 PANTHER PROTEIN PHOSPHATASE 2C 63 361 IPR015655 GO:0004722|GO:0006470
Blo18g00040 378 SMART PP2C_4 66 337 IPR001932 -
Blo18g00040 378 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 63 361 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo12g01046 Blo18g00040 CCT
Blo12g01046 Blo18g00040 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00591 Blo-Chr1:6502672 Blo18g00040 Blo-Chr18:265747 2.56E-115 dispersed
Blo01g01641 Blo-Chr1:56219899 Blo18g00040 Blo-Chr18:265747 2.20E-119 dispersed
Blo12g00848 Blo-Chr12:26748581 Blo18g00040 Blo-Chr18:265747 4.99E-116 dispersed
Blo12g01046 Blo-Chr12:28294284 Blo18g00040 Blo-Chr18:265747 1.18E-41 dispersed
Blo15g00061 Blo-Chr15:489600 Blo18g00040 Blo-Chr18:265747 1.08E-36 dispersed
Blo18g00040 Blo-Chr18:265747 Blo12g01039 Blo-Chr12:28238832 7.21E-46 dispersed
Blo05g00165 Blo-Chr5:1492491 Blo18g00040 Blo-Chr18:265747 6.63E-42 transposed
Blo17g00030 Blo-Chr17:170237 Blo18g00040 Blo-Chr18:265747 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00040 K14803 - zju:107421256 575.474