Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00060 ATGGATCGACAAGCCCTTGAATTTGCCGCTGCTTCAGCTCTGGCATATGCACAGCAACAGCGACAAACATCAGCTAATATGCAACAACCACAACCCTTTGGATTTCACCCGCAACATCAACAATTTCCTCCATCAGTGCATGGACCTCCTTTCCTTCCTCCACACCCTTCTATGCAACAATTCCCTTTTCATCAGCCCTTGCAACAACTCCATCCTCATCATCCACCCCATCCTCACCTTCTTCATTTTCAGCAGCAACAGCAAGCACCGCCATCCTTCCCTCCCCATTTACCTTCATCAGTGAGTCCACCTTTCCACGGACTATTTGATTCTGCTCCTCCACCCCTAGTTCCTCCACCTCAAATTCCTCCACCGTCAGATCCAGAGCTCCAAAAACGTATCGATAAACTTGTGGAGTACTCCTTAAAGAATGGTCCCGAATTTGAGGCAATGATCAGGGAGAAGCAGCAAGATAATCCTGCATACAGTTTTCTATTTGGTGGGGAAGGACATAGTTACTATCGTTATAAACTCTGGCTAACAAGTCATTCTCCCCCTGGCGGTGTATTCAATCCATCTTTTCCTCCATCATCCATATCCATGATGCATGCATCTCCAAACACTTTGATAAATCCATCACCTATGAATGCTCCAGCAGCTCCCCCTATGGGGGTTCCTCCTATGCACCAATTTGCACAGTTCTATGAACAGCAGCCACATCATCAACATGCCTTTGGTGCTCATGGTCAAGCAGATTATGATCAGTCACTAAACTCTTTTAAAGGTCTTTCTGGGCCACTTCCATCTGATGTTGCAATTGAGCTCAATAATGTGCTTAGCAATCTCACTGGTGCCAAAGAGTCAATTAAGGGCGCCAAAGCTTGGTTCATGCAGAGATCTCCTTTCGCTCCAGCTCTGGCTGAGGCACTTCGAGACCGGATTTTCTCGATAGATGATTCTGAGAGGCAACTTCATATAATATATCTTGTCAATGACATTCTTTTTGAAAGCTTGCCGAGGAGAACCAAAACTCACGAGCTTGATAATGAAGCTCTTGCATTCAAGCCCGTTTTAGGTCCCATGCTTGCTAGAGTTTACCACAATCCTAATATTAAGGAGGAAAATCAGTCAAAGTTACAAACACTTGTTCAGTTCTGGCTTTCCAGAGAGATTTATGATCAGGATACCATTAATGCTTTTGAGGGTGAAATCATGAATGGACCACCGGCTAATTCCTTCGCAGGGATTCCAAAAGATTTCCCCACTTCTGGAGATTCAGCTGCTGGATTACCATTACATTCAACCAACCGCGATATTCCTCACTGGCAGCCTGATAGGAAAACTTCTGTTCCAGGTTTATCAGCTCAAGAACACCCACACCCTGATAAACATGTGATCCCTGGCCAAGCTATGCCCCCATCCATCCCACTCCAACCTTTTCTTCCAAACTCAGCCACTGCCGGTGTGTATGCGGGGCCTATGCCCATACCATCTTCTATTCAACCAGCAAACCAGCAAGCTGCTCCGATCTTATTGCTTCCACAGGCAACTCAGTTGGGTGAAAAATTGCCACCATATCCTTTGTTCCCCCCTGGTCTTATTCCAGGAATGGTCAGAAAGATGCAGATTGGAAGCGGGGTTCCTTACTCTCCTATGAGTCCGTTGGATATCCCGACTGTAATTCCTCCATCAGACGTAACTCCATCAGAAGTTCTTGAGAGGGTATCGAAATTCTTCAAGGAGATTGGAGAGGTTAACCCTTCAGAAGGACCCATGGATTCAGATTTGAAAGACGAAGAAGACAACTACTATGAGAGAGATTCGCCAGTTCGGAAGGGAGGAGCGTGCATACCCCCTCCCGCCAATCTGCAGGTTGACCCGGAAACAGGGACTTATGCAGATGGAAGTGTAGACCGAAAAAGCGGATCAGGAAGGTTAGGACTCGGGGCTTTGGCGAATCCGAACGAGGTAAGTCAGTATGATGATGTTTATTCTTCTTATAGGAAACAGAGAAGCACCAATTATCATTCGTCCATGAGTGCCAGGACTGTAACTAGCCTAACCATGGCTGACATTTCCTTGGAGGACGTCAGAAACGAGACCGTTGATCTTGAGCGGATTCCTATCGATGAAGTTTTCCAGCAGCTCAAGTGTACGAGAGAAGGTTTGACAGGCGATGAAGGGGAGAAGAGGCTTGGAATTTTTGGTCCGAACAAGCTTGAGGAGAAAAAGGAGAGTAAGCTTCTCAAGTTTTTGGGATTTATGTGGAATCCCCTTTCATGGGTGATGGAATGTGCAGCAATTATGGCGATTGTTCTTGCCAATGGAGGGGGGAAGCCACCGGACTGGCAAGACTTCGTCGGAATTGTGGTTCTGCTCATTATTAACTCCACTATCAGCTTCATCGAGGAGAACAATGCCGGCAATGCTGCGGCTGCTCTCATGGCCGGTCTTGCCCCGAAGACGAAGGTGTTGAGGGATGGAAAATGGATGGAGCAAGAAGCGGCGATTCTGGTTCCCGGAGATGTGATCAGCATCAAGCTGGGAGATATTGTACCCGCAGATGCTCGACTTCTTGAAGGGGACCCTCTTAAAATCGACCAATCTGCTCTCACCGGTGAATCTTTACCGGTCACCAGGCACCCCGGCGATGAGGTCTTCTCCGGCTCCACCTGCAAGCAGGGTGAAATCGAGGCTGTCGTCATTGCCACCGGAGTCCATACCTTCTTCGGAAAGGCCGCTCATCTCGTCGACAGCACAAATCAAGTCGGTCATTTCCAAAAGGTTTTGACGGCCATTGGTAACTTCTGTATCTGCTCTATTGCAATCGGAATGGCTATCGAGCTCGTAGTGATGTTCCCGATCCAGAACAGACCATATAGAGAGGGTATCGATAACTTGTTGGTGCTTCTCATCGGAGGTATTCCGATTGCCATGCCAACGGTCCTGTCTGTAACTATGGCTATCGGTTCCCATCGTCTCTCCCAACAGGGGGCTATTACAAAGAGAATGACAGCCATTGAAGAGATGGCCGGAATGGACGTTCTCTGCAGCGACAAAACCGGGACACTCACACTCAACAAGCTTACAGTATTTGGGGAAGGTGTGGATAAAGATACCGTCGTCTTGCTCGCTGCGAGGGCTTCGAGAGTTGAGAACCAGGACGCTATCGACGCCTCCATTGTTGGAATGTTGGGTGATCCTAAAGAGGCCCGAGCTGGAATCAATGAGGTGCATTTCCTGCCTTTCAATCCGGTGGATAAGCGAACGGCTATCACATACATCGACGGCGAAGGTAACTGGCACCGGAGCAGCAAGGGCGCTCCTGAGCAGATTATCGAGCTCTGTGAACTCAGCGGAGAAGCGAGGAAGAAGGCTCATGCTGTGATTGACAACTATGCCGAACGCGGTCTTCGTTCTCTGGCTGTTTCTCAACAGACCGTATCGGAGAAGACGAAGGAGAGCCCGGGAGATAAATGGGAGTTCATTGGCCTCTTGCCCCTGTTTGACCCGCCAAGACATGATAGTGCAGAGACGATCAGACGGGCTCTTGAACTTGGTGTTAACGTTAAAATGATCACCGGCGACCAACTCGCCATCGGAAAAGAAACCGGACGGAGACTCGGAATGGGCACCAACATGTATCCTTCGTCCTCCCTTCTCGGCCAAAGCAAGGACGAGTCTATTGCCTCCATTCCCGTTGACGAGCTCATCGAGAAGGCCGATGGATTCGCCGGAGTCTTCCCCGAACACAAGTACGAAATCGTTAAGAAGTTGCAAGAGAGGAAACACATTTGTGGAATGACCGGAGATGGAGTCAACGACGCTCCGGCGTTGAAGAAGGCCGACATTGGAATTGCGGTGGCTGATGCGACGGACGCCGCAAGAAGCGCGTCCGACATTGTTCTGACGGAGCCGGGTCTGAGCGTGATCGTGAGCGCCGTTCTGACGAGCAGAGCCATCTTTCAGAGGATGAAAAACTACACCATTTACGCAGTTTCCATCACGATTCGTATCGTCTTGGGATTCATGCTCGTCGCTCTTCTATGGCAGTTCGACTTCTCGCCGTTCATGGTTCTGATAATCGCCATCTTGAACGACGGAACTATCATGACAATCTCTAAGGACAGAGTGAAGCCATCTCCTCTTCCGGACTCATGGAAACTCAAAGAAATTTTCGCCACCGGCGTCGTTCTCGGAACGTACATGGCCGTCATGACCGTCGTCTTCTTCTGGCTCGCAAACGAAACCGACTTCTTCTCGAACACTTTCGGTGTGAGATCAATCCAGGGTAGCCTGACTGAGCTCAACTCTGCTCTTTACCTCCAAGTGAGCATTATCAGTCAAGCTCTCATCTTCGTCACACGGTCAAGGAGCTGGTCTTTCGTTGAACGCCCCGGCGCCTTGCTCGTCAGTGCCTTCCTTGCTGCACAGTTGGTGGCTACCCTAATTGCAGTATATGCAAGTTGGGGATTTGCTAGGATTGAAGGCATTGGATGGGGATGGGCAGGAGTGATCTGGATCTACAGCATCATTACCTACTTCCCTCTCGACGTCCTCAAGTTCATCATCCGCTACGCACAGAGCGGGAAGGCGTGGGATAATATGCTTCAGAACAAGACTGCATTCACAACAAAGAAGGATTACGGAAAGGGAGAGAGAGAAGCTCAATGGGCGTTGGCTCAACGGACACTTCACGGACTCCAGGCGCCGGAAGTTCACTTTCACGACAAGAACACCCACCTCGACCACTCCGACCTTGCCGATGAGGCCAAGAGACGCGCTGAAGTTGCTAGGTTGAGGGAGCTTCATACATTGAAGGGCCATGTGGAATCAGTGGTGAAGCTGAAGGGTCTGGACATTGAAACCATCCAACAGCACTACACAGTTTAA 4893 49.36 MDRQALEFAAASALAYAQQQRQTSANMQQPQPFGFHPQHQQFPPSVHGPPFLPPHPSMQQFPFHQPLQQLHPHHPPHPHLLHFQQQQQAPPSFPPHLPSSVSPPFHGLFDSAPPPLVPPPQIPPPSDPELQKRIDKLVEYSLKNGPEFEAMIREKQQDNPAYSFLFGGEGHSYYRYKLWLTSHSPPGGVFNPSFPPSSISMMHASPNTLINPSPMNAPAAPPMGVPPMHQFAQFYEQQPHHQHAFGAHGQADYDQSLNSFKGLSGPLPSDVAIELNNVLSNLTGAKESIKGAKAWFMQRSPFAPALAEALRDRIFSIDDSERQLHIIYLVNDILFESLPRRTKTHELDNEALAFKPVLGPMLARVYHNPNIKEENQSKLQTLVQFWLSREIYDQDTINAFEGEIMNGPPANSFAGIPKDFPTSGDSAAGLPLHSTNRDIPHWQPDRKTSVPGLSAQEHPHPDKHVIPGQAMPPSIPLQPFLPNSATAGVYAGPMPIPSSIQPANQQAAPILLLPQATQLGEKLPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTVIPPSDVTPSEVLERVSKFFKEIGEVNPSEGPMDSDLKDEEDNYYERDSPVRKGGACIPPPANLQVDPETGTYADGSVDRKSGSGRLGLGALANPNEVSQYDDVYSSYRKQRSTNYHSSMSARTVTSLTMADISLEDVRNETVDLERIPIDEVFQQLKCTREGLTGDEGEKRLGIFGPNKLEEKKESKLLKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWMEQEAAILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMAIELVVMFPIQNRPYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVFGEGVDKDTVVLLAARASRVENQDAIDASIVGMLGDPKEARAGINEVHFLPFNPVDKRTAITYIDGEGNWHRSSKGAPEQIIELCELSGEARKKAHAVIDNYAERGLRSLAVSQQTVSEKTKESPGDKWEFIGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALLWQFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYMAVMTVVFFWLANETDFFSNTFGVRSIQGSLTELNSALYLQVSIISQALIFVTRSRSWSFVERPGALLVSAFLAAQLVATLIAVYASWGFARIEGIGWGWAGVIWIYSIITYFPLDVLKFIIRYAQSGKAWDNMLQNKTAFTTKKDYGKGEREAQWALAQRTLHGLQAPEVHFHDKNTHLDHSDLADEAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 1630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 424495 432274 - BLOR08548 Blo18g00060 73364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00060 1630 ProSitePatterns E1-E2 ATPases phosphorylation site. 1019 1025 IPR018303 -
Blo18g00060 1630 PANTHER PLASMA MEMBRANE ATPASE 689 1610 - -
Blo18g00060 1630 Pfam Surp module 134 179 IPR000061 GO:0003723|GO:0006396
Blo18g00060 1630 PRINTS H+-transporting ATPase (proton pump) signature 1300 1325 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo18g00060 1630 PRINTS H+-transporting ATPase (proton pump) signature 1269 1285 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo18g00060 1630 PRINTS H+-transporting ATPase (proton pump) signature 1126 1144 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo18g00060 1630 PRINTS H+-transporting ATPase (proton pump) signature 1241 1257 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo18g00060 1630 PRINTS H+-transporting ATPase (proton pump) signature 1441 1462 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo18g00060 1630 MobiDBLite consensus disorder prediction 605 627 - -
Blo18g00060 1630 Gene3D - 820 904 - -
Blo18g00060 1630 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 722 1487 IPR006534 GO:0008553|GO:0016021|GO:0120029
Blo18g00060 1630 SFLD p-type atpase 999 1321 IPR044492 -
Blo18g00060 1630 SMART 558neu5 274 405 IPR006569 -
Blo18g00060 1630 ProSiteProfiles SURP motif repeat profile. 133 177 IPR000061 GO:0003723|GO:0006396
Blo18g00060 1630 ProSiteProfiles CID domain profile. 267 408 IPR006569 -
Blo18g00060 1630 SUPERFAMILY HAD-like 1013 1316 IPR036412 -
Blo18g00060 1630 Pfam E1-E2 ATPase 819 996 - -
Blo18g00060 1630 Gene3D - 1580 1630 - -
Blo18g00060 1630 Gene3D Surp module 120 184 IPR035967 GO:0003723|GO:0006396
Blo18g00060 1630 Gene3D - 1014 1306 IPR023214 -
Blo18g00060 1630 MobiDBLite consensus disorder prediction 20 129 - -
Blo18g00060 1630 MobiDBLite consensus disorder prediction 43 60 - -
Blo18g00060 1630 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1244 1353 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo18g00060 1630 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 789 1217 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo18g00060 1630 CDD P-type_ATPase_H 722 1522 IPR006534 GO:0008553|GO:0016021|GO:0120029
Blo18g00060 1630 SMART surpneu2 131 183 IPR000061 GO:0003723|GO:0006396
Blo18g00060 1630 SUPERFAMILY Calcium ATPase, transmembrane domain M 703 1527 IPR023298 -
Blo18g00060 1630 Gene3D - 782 1496 - -
Blo18g00060 1630 MobiDBLite consensus disorder prediction 108 127 - -
Blo18g00060 1630 Gene3D - 1029 1169 IPR023299 GO:0000166
Blo18g00060 1630 SMART Cation_ATPase_N_a_2 703 775 IPR004014 -
Blo18g00060 1630 SUPERFAMILY Surp module (SWAP domain) 112 179 IPR035967 GO:0003723|GO:0006396
Blo18g00060 1630 MobiDBLite consensus disorder prediction 424 459 - -
Blo18g00060 1630 Pfam CID domain 275 399 IPR006569 -
Blo18g00060 1630 PRINTS P-type cation-transporting ATPase superfamily signature 867 881 - -
Blo18g00060 1630 PRINTS P-type cation-transporting ATPase superfamily signature 1164 1175 - -
Blo18g00060 1630 PRINTS P-type cation-transporting ATPase superfamily signature 1292 1304 - -
Blo18g00060 1630 PRINTS P-type cation-transporting ATPase superfamily signature 1017 1031 - -
Blo18g00060 1630 PRINTS P-type cation-transporting ATPase superfamily signature 1186 1196 - -
Blo18g00060 1630 PRINTS P-type cation-transporting ATPase superfamily signature 1269 1288 - -
Blo18g00060 1630 Pfam Cation transporter/ATPase, N-terminus 707 769 IPR004014 -
Blo18g00060 1630 SUPERFAMILY Calcium ATPase, transduction domain A 820 917 IPR008250 -
Blo18g00060 1630 Pfam haloacid dehalogenase-like hydrolase 1013 1283 - -
Blo18g00060 1630 SFLD C1.7: P-type atpase like 999 1321 - -
Blo18g00060 1630 MobiDBLite consensus disorder prediction 20 38 - -
Blo18g00060 1630 Gene3D - 272 407 IPR008942 -
Blo18g00060 1630 PANTHER CALCIUM-TRANSPORTING ATPASE 689 1610 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01132 Blo-Chr4:18483239 Blo18g00060 Blo-Chr18:424495 1.21E-52 dispersed
Blo17g00041 Blo-Chr17:264703 Blo18g00060 Blo-Chr18:424495 0 dispersed
Blo17g00048 Blo-Chr17:307230 Blo18g00060 Blo-Chr18:424495 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00060 K01535 - csv:101214655 1632.46