Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00061 ATGTGGGTGGCGAAAAACAATTCGGAAAGAAAAGACGGAGCCACTGGATTGGTAGCCATAGCCATTGACAAGGACAAAGGCAGCCAAAACGCTCTAAAATGGGCGACTGATAATCTCCTCCAGAGTGGCCAAACCGCCATTCTCATCCACGTGAAGCTCAAACCCCCACCAGTTCCCAACCCCCAGCTTCTCTTCCCCGCAACTGCCGTCGGGATGAACACTCCAGCTGATGCAGGCAACGACAATTTACCATCCTCAAAAGAGACAGAATCTGCCGTCAAGGATTTGTTTCTTCCCTTTCGCTGTTTTTGTACTCGTAAAGACATTCAATGCAAAGACGTTGTCCTAGAAGATGTAGATGTAGCCAAGGCATTGGTAGAATATGTCACACAAGCTGGACTTGAGAATTTGGTCGTTGGAGCCACAACCAAAGGTGGCTTCCTTAGACCTAATCTTTTGAGTCGAGCTATAATGGAGAGTTTCTTTAACTTGAAAATATGTTTTCATCCCAGAAGATTCAAAGCAACAGACGTTCCGGGCAATGTGTTGAAAGGATCGCCGGATTTCTGCAATGTGTTCGTCATATCAAAGGGGAAAGTTCAATCCACGCGGCTGGCCTCCTGCCCTGCTCCTCTTAGGTCTCCTCTCCGCGATCAAATATTAAACCAAACCAGTCTCCGATCAGATTCATCTGACAATGCAAAGCCTGGTCAGTTTCCGGCAGAATTCCGACCAAATTCCGACCAAATTCTTCACTTACCCATTGCTTTTAAGAGGAATCTGAATTTGAAAATTGTTCATGGAAGTAGATCTCCGTTCGGTCGAAAAGGGCATAACGGGAAGTCATACGGCGAAATCTCGTCACCCGATACAGATATTTCTTACGTGAGCTCTGGGAGGTCGAGTATTGACCGTTTAGCCTCTCCGTTCTACGAGAATCAAGATTTGGGAAGGGCTACTGCGCGGTTTTCGAGCAGCACAGAATCGGATATGAGTCACAGCTTCGAGTCGCTGCAATTAGGACGGAGGTCAGTCGATAGCTTTTCGCAGCTTTCTAATGAAAGTGAGAGACTATCGACCGGATCGCAGTCTATGGAAGAAGTGGAGGCTGAGATGAGGAGGCTGAAGCTGGAACTGAAGCAGACTATGGAAATGTATAGCACCGCCTGCAAGGAAGCACTCACAGCAAAACGAAAGAGGCACCCGCTTCAATGCTCCTCAATGTCTAACTCTGTCTTCTTATGGCTCCTGATGCAGGCGACAGAGCTGCAACGCTGGAAATTGGAAGAAGAACGAAAACTAGAAGAAGCTCGACTAGCTGAGGAGGCTGCATTGGCAGTTGCAGAACTCGAAAAGGCAAAGTCTAGAGCAGCCATCGAGGCAGCCGGTGCAGCCAGAAGAATTGCAGAGCTGGAAGCTCAGAAAAGAATAAACGCAGAAATGAAAGCCATGAAAGAATCAGAAGAGAAGAAGAAGGCCCTTTATGCTCTCGCAAATACAGACATCAGGTATAGAAAATACTCGATCGAAGAGATCGAATCTGCCACCGAGTTCTTCACCGAGTCGCTCAAGATCGGAGAAGGAGGTTACGGGCCTGTTTATAAATGTTTTCTGGATCATACTCCAGTTGCAGTCAAGGTTCTTCGCCCAGACGCGTCTCAAGGAAGATCACAGTTTCAGCAAGAAGTTGAAGTCCTCAGCTGCATACGCCATCCTAACATGGTTCTTCTCCTCGGAGCCTGTCCGGAGTACGGCTGCTTAGTCTACGAATATATGGACAACGGGAGCTTGGAAGATCGTCTGTTTCGGAGAGGGAATACTCCGCCTCTTTCTTGGCAGACCAGGTCCAGAATCGCCGCCGAAATTGCCACCGGATTGCTGTTTCTCCACCAGACCAAGCCGGAGCCGCTTGTCCACCGTGACCTCAAACCGGCTAACATTTTGCTCAGCCGGAACTTCGTCAGCAAGATCAGCGACGTCGGATTGGCCCGACTGGTACCCCCGTCGGTGGCAGATAATGTAACTCAGTATCGAATGACGTCGACGGCGGGAACGTTCTGCTATATTGATCCCGAGTATCAGCAAACCGGCATGCTTGGGGTGAAATCCGACGTATATTCTCTCGGAATCATACTTCTGCAAATGGTTACGGCCAGACCACCGATGGGTTTGACGCACCACGTCGGAAAGGCAATCGAGAAAGGCAGGTTTGCCCAGATGCTAGACCCTGCCGTGCCTGACTGGCCGGTCGAACACGCTCTTTCCTGCGCCAAGCTGGCTCTGAAATGCTCCGAGCTGAGACGAAAAGACCGGCCAGATCTCGGCAAGGAAGTCCTGCCGGAACTGAACAAGCTAAGAATGCTTGCTGATGATACTATGCATCCATCAGTAGGCAACAGCACAAATCCCTCCCCCAACCACAGCCAGATTTCTCTGCAGCTAGTAAGTAAAATTACATCATTTTGA 2466 49.23 MWVAKNNSERKDGATGLVAIAIDKDKGSQNALKWATDNLLQSGQTAILIHVKLKPPPVPNPQLLFPATAVGMNTPADAGNDNLPSSKETESAVKDLFLPFRCFCTRKDIQCKDVVLEDVDVAKALVEYVTQAGLENLVVGATTKGGFLRPNLLSRAIMESFFNLKICFHPRRFKATDVPGNVLKGSPDFCNVFVISKGKVQSTRLASCPAPLRSPLRDQILNQTSLRSDSSDNAKPGQFPAEFRPNSDQILHLPIAFKRNLNLKIVHGSRSPFGRKGHNGKSYGEISSPDTDISYVSSGRSSIDRLASPFYENQDLGRATARFSSSTESDMSHSFESLQLGRRSVDSFSQLSNESERLSTGSQSMEEVEAEMRRLKLELKQTMEMYSTACKEALTAKRKRHPLQCSSMSNSVFLWLLMQATELQRWKLEEERKLEEARLAEEAALAVAELEKAKSRAAIEAAGAARRIAELEAQKRINAEMKAMKESEEKKKALYALANTDIRYRKYSIEEIESATEFFTESLKIGEGGYGPVYKCFLDHTPVAVKVLRPDASQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMDNGSLEDRLFRRGNTPPLSWQTRSRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLSRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGIILLQMVTARPPMGLTHHVGKAIEKGRFAQMLDPAVPDWPVEHALSCAKLALKCSELRRKDRPDLGKEVLPELNKLRMLADDTMHPSVGNSTNPSPNHSQISLQLVSKITSF 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 434026 438127 - BLOR08549 Blo18g00061 73365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00061 821 Coils Coil 358 385 - -
Blo18g00061 821 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 10 149 - -
Blo18g00061 821 SUPERFAMILY Protein kinase-like (PK-like) 500 774 IPR011009 -
Blo18g00061 821 Coils Coil 418 491 - -
Blo18g00061 821 PANTHER OS02G0152300 PROTEIN 10 149 - -
Blo18g00061 821 SMART serkin_6 519 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00061 821 MobiDBLite consensus disorder prediction 225 244 - -
Blo18g00061 821 Gene3D Transferase(Phosphotransferase) domain 1 592 799 - -
Blo18g00061 821 Gene3D Phosphorylase Kinase; domain 1 498 591 - -
Blo18g00061 821 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 149 - -
Blo18g00061 821 Pfam Protein kinase domain 520 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo18g00061 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Blo18g00061 821 PANTHER OS02G0152300 PROTEIN 168 817 - -
Blo18g00061 821 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 168 817 - -
Blo18g00061 821 CDD STK_N 17 198 - -
Blo18g00061 821 Gene3D HUPs 17 160 IPR014729 -
Blo18g00061 821 ProSiteProfiles Protein kinase domain profile. 519 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01716 Blo-Chr1:56891870 Blo18g00061 Blo-Chr18:434026 0 dispersed
Blo14g00710 Blo-Chr14:17305298 Blo18g00061 Blo-Chr18:434026 0 dispersed
Blo18g00061 Blo-Chr18:434026 Blo18g00275 Blo-Chr18:2912519 0 dispersed
Blo18g00061 Blo-Chr18:434026 Blo17g00048 Blo-Chr17:307230 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84810 PF00069 Pkinase 8.20E-42 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00061 - - twl:119993747 955.666