Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00081 ATGGCTGCTGAAGCTCAACATTCAGAGGCTGAGAGCACCTCGAATTGTAACTCCAACTCTTCTTTATCCCCACCATCGTCCCCATCTTCGACACCCTCCACTCAGTCTCCTCAGGACATTCTTTCTAACCCTAACTTTTCTTCGTCGGAACCGAAGAAGAAGAAGCGAATGATAGATACCAGCAAGCACCCACTTTTCAGAGGCGTTCGGATGCGCAGTTGGGGCAAATGGGTGTCTGAAATTCGCGAGCCTCGCAAGAAATCGCGCATTTGGCTCGGAACTTTCCCGACGCCGGAAATGGCTGCCAGAGCTCACGACGTCGCCGCTTTGAGCATCAAAGGTAATTCCGCTATTCTTAACTTCCCCGACCTCGTTGACTCTCTTCCACGCCCGGTATCTCTCGCTCCGAGAGATGTCCAAGCAGCGGCGGTGAAGGCAGCTCAGATGTACAAATTTGATTCGGCGTCGTCGTCCTTAGTTTCGGCGGCGTCGACGGAGAACGAATCGGACGATTTGGGGGAGATCGTTGAGCTGCCGAGCTTAGGAACAAGTTACGAGTCGAACGAGTTGAAGAACGAAATCGTGTTGGTGGACTCAGTGGATGGGTGGTTATACCAACCGCCATGGTTGCAAAGCTTGGAGGACTGTGGATTCAACAATGCGAGCGAGGAGTTGACTGCTGGAAAATTTGAGAGTTTGCTTTGGGAGTATTGA 714 51.82 MAAEAQHSEAESTSNCNSNSSLSPPSSPSSTPSTQSPQDILSNPNFSSSEPKKKKRMIDTSKHPLFRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPDLVDSLPRPVSLAPRDVQAAAVKAAQMYKFDSASSSLVSAASTENESDDLGEIVELPSLGTSYESNELKNEIVLVDSVDGWLYQPPWLQSLEDCGFNNASEELTAGKFESLLWEY 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 691852 692565 - BLOR08569 Blo18g00081 73385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00081 237 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 9 221 - -
Blo18g00081 237 MobiDBLite consensus disorder prediction 1 62 - -
Blo18g00081 237 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 221 - -
Blo18g00081 237 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Blo18g00081 237 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Blo18g00081 237 MobiDBLite consensus disorder prediction 7 48 - -
Blo18g00081 237 CDD AP2 64 124 IPR001471 GO:0003700|GO:0006355
Blo18g00081 237 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Blo18g00081 237 SUPERFAMILY DNA-binding domain 65 123 IPR016177 GO:0003677
Blo18g00081 237 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Blo18g00081 237 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Blo18g00081 237 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00315 Blo-Chr8:4539119 Blo18g00081 Blo-Chr18:691852 8.00E-57 dispersed
Blo18g00081 Blo-Chr18:691852 Blo07g01353 Blo-Chr7:33666977 2.12E-37 dispersed
Blo18g00657 Blo-Chr18:12325563 Blo18g00081 Blo-Chr18:691852 7.27E-26 dispersed
Blo01g01775 Blo-Chr1:57464582 Blo18g00081 Blo-Chr18:691852 2.55E-76 wgd
Blo12g00754 Blo-Chr12:25896657 Blo18g00081 Blo-Chr18:691852 5.23E-78 wgd
Blo17g00070 Blo-Chr17:534712 Blo18g00081 Blo-Chr18:691852 1.86E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13562 PF00847 AP2 2.00E-13 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00081 K09286 - zju:107420677 279.256