Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00090 ATGTTTAATCATTTGGGGTGGTTCATTGGTGTGAATCATATAGAACGGCCTGCTAAGAGATTGCCTGATGCAAAGTCCCGACCGGCTAAGGTTAAGCCGGTGGCTATGTTGGATACTGTGGAGGAGATTGCAATTTACATCCATAGGTTCCACAATCTCGACCTCTTCCAGCAAGGATGGTATCAAATCAAGATAACTATGAGATGGGAGGACAATGAGTCTACTTTAGCGGGAACACCTGCGAGAGTTGTTCAGTATGAAGCTCCTGATTTGGGTTCGGGTGATACCTATGGGGTATGGAAGATTGATGATACAGACAACAGTTTCTCAACACAGCCTTTTAGGATCAAGTATGCAAGGCAAGATGTTCTTCTATCAATCATGATCGCATTTAATCTTCCTCTCAATATATACCAGGGTCCGTCTCCAACTGCTGTTATTTTAAAGTTTGAGCTAATGTATGCTCCTATAATGGAGATTGGACTGGAGTTGCAGGCGTCTCTGGATGCTTGTTCTGCTGCAGTCCATGAATTTCGAATACCTCCTAAAGCGCTTTTGGGATTGCATTCTTATTGCCCTGTTCATTTTGATGCATTTCATGCTGTTCTTGTGGACGTCAGCATACACATATGCCTATTGAATTCATACACTTCTCAAGCAAAGGTATCCAGTGATTGGAATACTGCTGAAAGTGTTGCCAGGAAACCTTTAGATTGGCCAAATCAAGCATTGAGTGGATTGGCCACTGGTGATGTGAACGAGGTCATGCTTGTTAAAGCATTAATGACTGCACGTGACATTTTGCTTGAGGAGATATTGACACTTAGTAAAGCAGTTGACCAAGCAATTGACCTAACTGATTTTATATCAAGAATGGATGATTTGAACCAGTTCAACTCTGTATTACACACGAATGTACATGCTACAGATGCCGATGCTACTGGGCAAGGCAATGAGGACATTCATGGTGGTCTAGATTTTCAAAGTGATGAAATGCTCCACTCACTTTCTGGGGGCCATGTATTGAACTCTTTTTACTTATTGGGGGATCAACTCTTATATTTATGGAACACTTTTCTGAAGTTTCACAGGTCTAACAAAACAAAGATTCTTGAATATTTGCGAGATGCATGGACTAAGGATCGTAGAGCTGAATGGTCAATATGGATGGTGTACTCCAAGGTTGAAATGCCTCATCATTACATAAATGGTGTAAATGATGAGCCTTCACACCATGGTGTCCATAGAAGAGTCACAAGCTTGTGGAAATTAGGGGATGATCCTTCCCAGACAGCAGCTATGCATGCTGATCTTCATCGCCGTGGTATAGCACAGATGAAGATCAACAATCCATCAATCCAAGACATGCACATATTTGGTGATCCATCCCGTATTCCTGTTGTAATTGTTGAGCGTGTCATGAATGTTCCGCGACGTACAATCAGTGAAAATTCATACTTGAGACATCTGGATTTGATAGATACTCTTAGCTTGCAAACTGGATCAAGCTCTGAATCTATAGACAAACCATCAGGCACGAGCTCAAAAAAGAGTGGCCGTGTTTTGAAGATTGTTATCTTTGTGCATGGTTTTCAGGCAAGTATGATGAAGCTGTACAGGGACATCATCTTGGTAACTGTACAGGGACATCATCTTGATCTACGGCTTGTTCGGAATCAATGGCTTTTGATAGATCCAAAGATTGAGTTTCTTATGTCAGAGGTCAACGAAGACAAAACATCCGGAGACTTTAAAGAAATGGGACTGAGGCTCGCACAGGAAGTAGTTTCTTTTATAAAAAAGAAAATGGATAAAGTTTCAAGATATGGAAGCTTAGGAGATATTAAGATAAGTTTTGTGGGACATTCTATTGGAAACGTTATCATAAGAACGGCATTAACAGAAAGTATAATGGAGCCATTCCTACGGCACCTGCATACCTATGCTTCCATTTCTGGCCCACACTTGGGATATCTTTACAGTTCTAACTCTTTATTTAACTCGGGCCTATGGCTTTTGAAAAAGTTCAAGGGCACACAATGCATTCATCAGCTTACTTTCACTGATGATCCTGATCTCCAAAATACATTCTTCTACAAACTATGCAAGCAAAAGACATTGGACAACTTCAAGCATATAATCCTATTTTCTTCACCCCAGGATGGTTATGTCCCATATCACTCTGCCAGAATCGAACTCTGCCAGGCTGCTGCCGTGGACTATTCGAAAAAAGGTAAAGTGTTTCTCGAGATGCTGAATAATTGTTTGGACCAAATACGAGCTCCTTCCTCCGACCGTCGCGTGTTCATGCGATGTGATGTCAACTTCGACACCTCCTCCTACGGCAAGAACTTGAACAGTTTCATTGGTCGAGCCGCACACATTGAGTTTCTAGAGTCCGACATATTTGCAAGGTCCTTGAAAGCAACTGTGTTGGATTCCAATTTCAAAATTGTTGCATCTGAGCTAGTTCACTTTGACTCTGAGTTGCCCCATTACAAAACCAAAGATGGAGTTTATAGGGATTCCTCCATTAATGGTCGGATTGTTTCACCCACCATTATGTGGGTAGAAGCACTGGATCTCATGCTTCAGAAACTCTCCAAATCAAACCTGGACTTTCAGAAAATCTCTGCTATTTCTGGTAGTGGACAGCAACATGGAAGTGTGTATTGGATGAAAGGAAGTGCTGCAATATTATCATCCTTGGATTCAAAGAAGCCATTGACCAGCCAACTGAGTGATTCTTTTTCAATAAAGGAATCCCCAATTTGGATGGACAGTAGCACCACAGCTCAATGTAGACTGATTGAGGAAGCTGTTGGAGGGGCTCTTGAATTATCCCGTTTGACAGGATCACGGGCCCATGAACGATATACGGGTCCACAAATTAGGAAGATATTTGAAACACAGCCTAATGTTTATAACAATACGGAAAGAATTTCTCTCGTTAGTTCATTCATGGCCTCTATTTTTATCGGTGCTTATGCGAGTATCGATGAAACTGATGGTGCTGGCATGAACTTGATGGATTTTAAGCAACGGGCCTGGTCTAATACGGCACTAGAGGCCACTGCGCCTGGCTTGGAAGGAAAGCTTGGAAAGTTAGCCCCTGCATTTTCTGTTGCTGGCTATGTTGCTCCCTACTTTGTGGAGAGGTTCGGCTTTAACCGGAATTGCTTAATAATTCAATGGTCAGGGGACAACCCAAACAGCCTGGCAGGTCTAACTCTTAGTACCCCGGGAGACTTGGCAATCAGCCTCGGCACTAGCGACACGGTTTTCGGCATTACTAGAGATCCTCAGCCCAGACTGGAGGGACATATTTTCCCTAATCCGGTTGACATTGAAGGCTACATGGTGATGTTGGTCTACAAGAACGGATCCTTAATGCGTGAAGATGTTCGAGATCGCTGTGCGAAGAAATCATGGGAAACTTTCAATGATTACTTGCAGCAAACACCACCTTTGAATGGTGGAAAAATCGGTTTTTATTATAAGGAGCATGAAATTCTTCCTCCTCTTCCGGTCGGTTTTCATCGCTATGTTCTTGAAAATTTCTCGGGTGATGCATGCGAGGGAGTGAAAGAACGAGAAGTTAACGATTTTGATCCTCCCTCCGAGGTGAGGGCATTGATCGAAGGCCAGTTTCTGTCGATGAGAGCTCATGCGGAGAGATTTGGAATGCCGGCTCCTCCAAAGCGCATAATAGCTACTGGTGGAGCTTCTGCAAATATGACCATACTCAGCTCAATGGCTTCAGTCTTTGGCTGTGATGTCCATACAGTTGAGAGGCCTGATTCTGCTTCCCTCGGAGCTGCGTTGAGGGCTGCTCATGGCTGGTTGTGCGACAACAAGGGTAGATTTGTGCCCATTTCATGCATGTACAAGGACAAGTTAGACAACTCATCGCTTAGCAGTAAGCTGTCCATGGCGGCCGGAGAACCTCCACTAGTTGCCAAGTATGATTCGCTGATGCGGAAGAGAATGGAAATTGAGAACCGACTCGTCCAAAAGCTTGGACGCTGCTGA 4032 43.35 MFNHLGWFIGVNHIERPAKRLPDAKSRPAKVKPVAMLDTVEEIAIYIHRFHNLDLFQQGWYQIKITMRWEDNESTLAGTPARVVQYEAPDLGSGDTYGVWKIDDTDNSFSTQPFRIKYARQDVLLSIMIAFNLPLNIYQGPSPTAVILKFELMYAPIMEIGLELQASLDACSAAVHEFRIPPKALLGLHSYCPVHFDAFHAVLVDVSIHICLLNSYTSQAKVSSDWNTAESVARKPLDWPNQALSGLATGDVNEVMLVKALMTARDILLEEILTLSKAVDQAIDLTDFISRMDDLNQFNSVLHTNVHATDADATGQGNEDIHGGLDFQSDEMLHSLSGGHVLNSFYLLGDQLLYLWNTFLKFHRSNKTKILEYLRDAWTKDRRAEWSIWMVYSKVEMPHHYINGVNDEPSHHGVHRRVTSLWKLGDDPSQTAAMHADLHRRGIAQMKINNPSIQDMHIFGDPSRIPVVIVERVMNVPRRTISENSYLRHLDLIDTLSLQTGSSSESIDKPSGTSSKKSGRVLKIVIFVHGFQASMMKLYRDIILVTVQGHHLDLRLVRNQWLLIDPKIEFLMSEVNEDKTSGDFKEMGLRLAQEVVSFIKKKMDKVSRYGSLGDIKISFVGHSIGNVIIRTALTESIMEPFLRHLHTYASISGPHLGYLYSSNSLFNSGLWLLKKFKGTQCIHQLTFTDDPDLQNTFFYKLCKQKTLDNFKHIILFSSPQDGYVPYHSARIELCQAAAVDYSKKGKVFLEMLNNCLDQIRAPSSDRRVFMRCDVNFDTSSYGKNLNSFIGRAAHIEFLESDIFARSLKATVLDSNFKIVASELVHFDSELPHYKTKDGVYRDSSINGRIVSPTIMWVEALDLMLQKLSKSNLDFQKISAISGSGQQHGSVYWMKGSAAILSSLDSKKPLTSQLSDSFSIKESPIWMDSSTTAQCRLIEEAVGGALELSRLTGSRAHERYTGPQIRKIFETQPNVYNNTERISLVSSFMASIFIGAYASIDETDGAGMNLMDFKQRAWSNTALEATAPGLEGKLGKLAPAFSVAGYVAPYFVERFGFNRNCLIIQWSGDNPNSLAGLTLSTPGDLAISLGTSDTVFGITRDPQPRLEGHIFPNPVDIEGYMVMLVYKNGSLMREDVRDRCAKKSWETFNDYLQQTPPLNGGKIGFYYKEHEILPPLPVGFHRYVLENFSGDACEGVKEREVNDFDPPSEVRALIEGQFLSMRAHAERFGMPAPPKRIIATGGASANMTILSSMASVFGCDVHTVERPDSASLGAALRAAHGWLCDNKGRFVPISCMYKDKLDNSSLSSKLSMAAGEPPLVAKYDSLMRKRMEIENRLVQKLGRC 1343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 740861 753279 + BLOR08578 Blo18g00090 73394

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00090 1343 Pfam FGGY family of carbohydrate kinases, N-terminal domain 801 1073 IPR018484 GO:0005975|GO:0016773
Blo18g00090 1343 Pfam FGGY family of carbohydrate kinases, C-terminal domain 1084 1280 IPR018485 GO:0005975|GO:0016773
Blo18g00090 1343 SUPERFAMILY Actin-like ATPase domain 805 1075 IPR043129 -
Blo18g00090 1343 PANTHER - 29 807 - -
Blo18g00090 1343 Gene3D alpha/beta hydrolase 523 754 IPR029058 -
Blo18g00090 1343 Gene3D - 804 1290 - -
Blo18g00090 1343 Gene3D - 1078 1263 - -
Blo18g00090 1343 SUPERFAMILY alpha/beta-Hydrolases 524 732 IPR029058 -
Blo18g00090 1343 PANTHER UNCHARACTERIZED 29 807 IPR044294 -
Blo18g00090 1343 SUPERFAMILY Actin-like ATPase domain 1080 1281 IPR043129 -
Blo18g00090 1343 Pfam Putative serine esterase (DUF676) 522 734 IPR007751 -
Blo18g00090 1343 CDD FGGY_D-XK_euk 806 1279 IPR042024 GO:0004856|GO:0042732
Blo18g00090 1343 Pfam Protein FAM135 148 212 IPR022122 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00090 - - - mcha:111022895 1186.4
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00079 Blo-Chr17:590651 Blo18g00090 Blo-Chr18:740861 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g578 . . Bda01g00929 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag1150 . . . . . . Blo18g00090 . . Bpe02g01173 . Bma01g01358 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007815 2 1 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 0 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00090 Blo_Chr18 FPKM 2.074254 3.365306 8.607735 8.317059 20.489658 20.826859 22.231989 13.045544 12.494593 14.13027