Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00103 ATGAAAGGTGACTATGCGGAGCAAAAGAATGAAGCTCAGAACATCTTCTCTAAGCTTCACAACCGACATAGCCACTATAACCAACCGCAGCTACAGACCCATCTGTTTTCCAATCCCTTCCCCCTCTCCTCAGTTAGAGAATGTCAAACCTCAGAAGAAGACGACGCCAGTCGAAGCAGTGGACAACCGGCCGCCGGGATAATCGAGCCTAAGTTACATTCCGAGCTCAGCTCCGGCGACGGAGCAACTCTAGAAGTCGTAAGGCGCCCGAGGGGCCGCCCCCCCGGTTCCAAAAACAAACCAAAACCCCCCGTTATCATTACCAGAGACTCAGAACCTGGGATGAGCCCTTACATTTTTGAAGTTCCGGGAGGTAACGACATAGTGGAAGCCATTTCCTACTTCTCTCGCCGGAAAAATATGGGTATCTGCATCCTCAGCGGTTCGGGAACCGTCGCTAATGTAAGTCTCCGGCAACCATCGAGCACTCCCGGACCAATCATCACCTTTCACGGCCGGTTCGAGATCTTATCGATTTCCGCCACCTTCCTCCCTCATACGATGTCGTTCACGGTCCCCAACTCATTCACCATTTCTCTTGCGGGCCCTCAAGGACAGATCATCGGTGGTTTAGTCGCCGGATCACTGGTTGCGGTCGGGACGGTGTTCGTGATAGCCGCTTCTTTTAACAACCCTTCCTATCATCGGCTATCGGACGAAGACGAGGTTAGAAATTCAGTTTCAGGCGGTGAAGGTCAATCGCCTGCTGTCTCAGGAGGCGAAGAAAGTGGTGGGCACGCTCCGGTTGAGTCAGGTGATTTGGACGTCCCTGCATTCTCTGCAGCTATACAAGCACATCAAAAGAGGATCACCCAGGCAATTTTACGTCATGCTTCGAAGATTTGTTCTTCGCACGACATTGGTGTAAGAACTCAGGCAGTAATAGGGAATCCAAAAGAAAAGATTTGTGAAGTTGTTAAGTGCTTGCATGCTGATCTGCTTGTAATGGGTTCCCGCCCTTCTGGCTCCATCAAAAGGATTTTTTCAGGGAGTGTCAGCAAATATTGCGCAACCCACGCAACCTGTCCGGTCATTATTGTCAAGGGCGAAAAGAACTGA 1119 50.76 MKGDYAEQKNEAQNIFSKLHNRHSHYNQPQLQTHLFSNPFPLSSVRECQTSEEDDASRSSGQPAAGIIEPKLHSELSSGDGATLEVVRRPRGRPPGSKNKPKPPVIITRDSEPGMSPYIFEVPGGNDIVEAISYFSRRKNMGICILSGSGTVANVSLRQPSSTPGPIITFHGRFEILSISATFLPHTMSFTVPNSFTISLAGPQGQIIGGLVAGSLVAVGTVFVIAASFNNPSYHRLSDEDEVRNSVSGGEGQSPAVSGGEESGGHAPVESGDLDVPAFSAAIQAHQKRITQAILRHASKICSSHDIGVRTQAVIGNPKEKICEVVKCLHADLLVMGSRPSGSIKRIFSGSVSKYCATHATCPVIIVKGEKN 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 928542 937669 - BLOR08591 Blo18g00103 73407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00103 372 MobiDBLite consensus disorder prediction 69 110 - -
Blo18g00103 372 MobiDBLite consensus disorder prediction 10 27 - -
Blo18g00103 372 Gene3D - 117 247 - -
Blo18g00103 372 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 231 IPR005175 -
Blo18g00103 372 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 278 370 - -
Blo18g00103 372 Gene3D HUPs 259 372 IPR014729 -
Blo18g00103 372 PRINTS Universal stress protein signature 346 368 IPR006015 -
Blo18g00103 372 PRINTS Universal stress protein signature 328 340 IPR006015 -
Blo18g00103 372 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 241 - -
Blo18g00103 372 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 34 266 - -
Blo18g00103 372 MobiDBLite consensus disorder prediction 238 270 - -
Blo18g00103 372 MobiDBLite consensus disorder prediction 1 27 - -
Blo18g00103 372 CDD DUF296 117 229 IPR005175 -
Blo18g00103 372 CDD USP_Like 275 367 - -
Blo18g00103 372 ProSiteProfiles PPC domain profile profile. 112 250 IPR005175 -
Blo18g00103 372 Pfam Universal stress protein family 275 368 IPR006016 -
Blo18g00103 372 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 266 IPR014476 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00813 Blo-Chr10:25750560 Blo18g00103 Blo-Chr18:928542 1.33E-32 dispersed
Blo11g00012 Blo-Chr11:111911 Blo18g00103 Blo-Chr18:928542 1.82E-103 dispersed
Blo17g00096 Blo-Chr17:747745 Blo18g00103 Blo-Chr18:928542 2.71E-156 dispersed
Blo18g00103 Blo-Chr18:928542 Blo03g00383 Blo-Chr3:9086916 1.23E-52 dispersed
Blo14g00293 Blo-Chr14:2968866 Blo18g00103 Blo-Chr18:928542 9.55E-49 transposed
Blo12g00730 Blo-Chr12:25644970 Blo18g00103 Blo-Chr18:928542 5.72E-86 wgd
Blo17g00094 Blo-Chr17:731739 Blo18g00103 Blo-Chr18:928542 2.53E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00103 - - zju:107421268 333.569