Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00105 ATGGCGAGAGAGAAGATCAAGATCCAGAAGATTGATAACTTGACAGCTAGACAAGTCACTTTCTCCAAGAGAAGACGAGGGCTTCTCAAGAAAGCTGAGGAGCTCGCTGTTCTCTGCGATGCTGAAGTTGCTCTCCTCATCTTCTCCGCAACTGGAAAGCTCTTTGAATATTCCAACAGCAGCATGAAAGACATACTTGCAAGGTACAGTTTGCAAGGCAATAACCTGAGAAAACTGGACCAACCTTCCTTGGAGCTTCAGCTGATGGAGAATAGCAATTGCAGCAGAATGAAAAAGGAAATTGCAGATAAGGCTCATCAACTGAGACAAATGAGAGGTGAAGATCTTGATGGTTTAAAATTGGACGAGTTGATGCAATTAGAGAAATTGCTTGATGCAGGTCTCACCCGTGTTGTCAAGACTAAGGACGAACGGATTATAAATGAAATCAACACCCTTGAAGCTAAGGTTAGAATTTATCAGCAGGTGGTCATGCTGTCTAAAGACAAAAGACCCGAATCCGAAGTTGCTATCCAAGAAGAAGGCGTGTCATCCGATCTGTCAGCCACCAACGTTTGCAGCTGTAACAGTGGCCCTCCGCTCGACGACGATTGCTCCGATACTTCTCTCAAGCTAGGACCTGAGAATTCTTCACTCTCTCGATCGAGGATCACTACCTTGTTCTTGATCGCGATGAAGGACCAATCGAATGGAGGTTTTGAGGTTTTTGATTTTCAGGAACAAGATGAGCTTCCGGAGTTTGTCGCTGGGAGATTTCTTAGCAAATTCAAAAACCCTAGCCCCTGCGATCATCAGACCTTGAACTATGTAACTCACGAATGTGGTACGTCACTTATACCGAAAATTACTGCACCTTGTGTAGATGTTGATTTAGTTGACTGTGATTGTGGCAGTGAAGATGTTGCATCTCATGGTATCCTGTGCTCTGCTGGAGAGTACGTCGGTGCAATTATAGAGAAATCCTCAGTAGATTCTGTCCCGAGTTCTAATTGGATATGTCATGAAAAAGAAACGCATTTGGAAGTATTTGAGTCCAGGGATTTTGGTTCTGAATTAGGGAAAATATGTTCAAAGTCACAAGATGCTTCGCCAAAGAATGAGGTATTGAGTTGCACCCTTTCAGAGTCTCCTTCCAGCAATGAGCCAGTTGATACCATATCCAATTCAAGTCGTGGTCTGAATGGGGGTTGTTCTTCAAGTTCTGCTTCTGAAATTGCAGAAGATGATGATCTGATGAATGGCTACGCATCCACAAGTTTCGTTGAGTACAAGGAGTTGGATAATGTAAATCAGGAGATCAATCTTTTTCCGGATTATATAGTATATCGAGATAATTATTGCAATGAGTCTCTTTTAACTTTTTCACATAGTGGCATCAAAATCAATTGTATTGCTGCGTGTGGAAACCTTGGGTTCCTCAACTTTGAATGGGCAGTTGATGATCTGATTAATATCGAGTGTCAATGGTATCAAAGGGTTGACACTATCATCATCAAGCTTTGCGTAATATCAAAGGATGCAGTTCAACCGGACCTCAGATGTGACACTTCAGGTATTGAGGAGATTAAGGTTGCTGTCGTTGACTCAAACTGGTCTGAGAAGCAGGGAAAAATCGCGTCATTGAATTTGAAATACATGGCTATCTGGGATGGTTTGCCCGATTTTGATGAGCTTTTTGAAGAGGTTGTCTATCCGAAAGGTGATTCAGATGCTGTTACCATTTGCAAGCGAGATGTTGATCTATTACAGCCAGAGACATTCGTAAATGATACAATAATTGACTTTTACATCAAGTATTTGAAGAATCAGATTGATGATGAAGAAAGAAATAGATTTCATTTTTTCAATAGTTTCTTCTTTCGAAAGATGGCAGACCTAGATAAAGATCCATCCAGTGCTTCTGATGGCAGAGCTGCTTTTTTACGTGTTCGAAAATGGACTAGAAAAGTGGATTTTTTTAACAAGGATTTTATCTTCATTCCCATAAACTTCAATCTTCATTGGAGTTTAATCATCATATGTCATCCTGGTGACATCATTAAACACAATGACGGAGACTGGAAGAATTCTCTTAGAGTGCCTTGTATATTGCATATGGATTCTATTAAAGGAAGTCATGGTGGTCTTAAAAGTCTTATTCAAAGTTATTTGTGGGAAGAGTGGAAAGAGAGGCAAAAGAATACAGAGCAAGATATTTCATCCAAATTTTCAAGCCTTCGGTTTCTCCCTCTTGAGCTTCCGCAGCAGGAAAATTTATTTGATTGCGGCTTGTTTTTGCTACACTATCTAGAGCTCTTTCTCAAAGAGACTCCTGTTACTTTCAATCCTTTCAAAATTTCCAAGTTCTCCAAGTTTCTTAATGTGGATTGGTTTCTGCCTTGTGAAGCTTCTCTCAAACGCGCTCTGATTCAAAAATTAATCTTCGAGTTACTTGAAAACAGATCTCAAGAAACCCCTTCTTTAGCTGCTTGTGATAACCAGAAGTCAAGACTCCCAAAAGTTAATGAGAATAAAAGTGGCCCGGACTATCTTTCAGAGAGATGCAATCATGGTAAATGCGATGGGAGCGTATCAAACTCCCAAGCTTGTGATGGGATTGAACTCACACTAATCTCAGCACCATCTAGAGACAACCAGGTCGTTGGCAATTTAGACCTAGTCGCCAGGGATTTGTTTCATTCAGTGGCTTCTTCTGGATCACTACTTGAACAGCATCGATCATTGTCACAGTCATTATCATACTTCCATTTTGGTGGGGCTATATCCAGAATGCAGGAAGATGGCGAAGAAGAGTGTGGACTTGGGTATTTACCTTTGGAGATTGGAATAGAAACTCAAGGGTGCGATTTTCCATATTCATCACGCGATTTTGATGCTGATGCATCTTATGCCTCGGGAATGTCCATGCGAGATGAGCAAAAGGATGTCGACTCGTCATCCCCTGAAACATCAGCATGTACTTCCAGTTCGTGCGGCTCAGAGAATGTTGGGATTACTGAAAATAGTCAAAGCTTAAATATTCCAAGCCCAAGTCAGAAAGTAGGGATCTCCCCATCAATGAAAGATATAATTGAAACTCCTCCAGACACCGACAAGTTACCCGATGCCGTCGAAACTCGCCCTTCCTCATTATGTGAAGAAAATCACGACATCTCACCAATTGAGGGTATCGAAATCGTAATGCAAATTAAAGAGCTAGAATCCTACGCAGTTGCGCAATCAGATGAACAAGAAGAACATCCTGCGAAGAGGCTGAGATTGACATGTTCTCTTGAAGGGGTAGAAGGTAATTCTCAAGTTTGA 3324 41.31 MAREKIKIQKIDNLTARQVTFSKRRRGLLKKAEELAVLCDAEVALLIFSATGKLFEYSNSSMKDILARYSLQGNNLRKLDQPSLELQLMENSNCSRMKKEIADKAHQLRQMRGEDLDGLKLDELMQLEKLLDAGLTRVVKTKDERIINEINTLEAKVRIYQQVVMLSKDKRPESEVAIQEEGVSSDLSATNVCSCNSGPPLDDDCSDTSLKLGPENSSLSRSRITTLFLIAMKDQSNGGFEVFDFQEQDELPEFVAGRFLSKFKNPSPCDHQTLNYVTHECGTSLIPKITAPCVDVDLVDCDCGSEDVASHGILCSAGEYVGAIIEKSSVDSVPSSNWICHEKETHLEVFESRDFGSELGKICSKSQDASPKNEVLSCTLSESPSSNEPVDTISNSSRGLNGGCSSSSASEIAEDDDLMNGYASTSFVEYKELDNVNQEINLFPDYIVYRDNYCNESLLTFSHSGIKINCIAACGNLGFLNFEWAVDDLINIECQWYQRVDTIIIKLCVISKDAVQPDLRCDTSGIEEIKVAVVDSNWSEKQGKIASLNLKYMAIWDGLPDFDELFEEVVYPKGDSDAVTICKRDVDLLQPETFVNDTIIDFYIKYLKNQIDDEERNRFHFFNSFFFRKMADLDKDPSSASDGRAAFLRVRKWTRKVDFFNKDFIFIPINFNLHWSLIIICHPGDIIKHNDGDWKNSLRVPCILHMDSIKGSHGGLKSLIQSYLWEEWKERQKNTEQDISSKFSSLRFLPLELPQQENLFDCGLFLLHYLELFLKETPVTFNPFKISKFSKFLNVDWFLPCEASLKRALIQKLIFELLENRSQETPSLAACDNQKSRLPKVNENKSGPDYLSERCNHGKCDGSVSNSQACDGIELTLISAPSRDNQVVGNLDLVARDLFHSVASSGSLLEQHRSLSQSLSYFHFGGAISRMQEDGEEECGLGYLPLEIGIETQGCDFPYSSRDFDADASYASGMSMRDEQKDVDSSSPETSACTSSSCGSENVGITENSQSLNIPSPSQKVGISPSMKDIIETPPDTDKLPDAVETRPSSLCEENHDISPIEGIEIVMQIKELESYAVAQSDEQEEHPAKRLRLTCSLEGVEGNSQV 1107
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 971128 990527 + BLOR08593 Blo18g00105 73409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00105 1107 MobiDBLite consensus disorder prediction 378 409 - -
Blo18g00105 1107 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Blo18g00105 1107 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Blo18g00105 1107 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Blo18g00105 1107 CDD MADS_MEF2_like 2 69 IPR033896 GO:0000977|GO:0045944
Blo18g00105 1107 ProSiteProfiles Ubiquitin-like protease family profile. 579 773 IPR003653 GO:0006508|GO:0008234
Blo18g00105 1107 SUPERFAMILY SRF-like 3 77 IPR036879 GO:0003677|GO:0046983
Blo18g00105 1107 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Blo18g00105 1107 ProSiteProfiles K-box domain profile. 87 182 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo18g00105 1107 Gene3D - 619 750 - -
Blo18g00105 1107 Gene3D - 571 815 - -
Blo18g00105 1107 Pfam K-box region 92 162 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo18g00105 1107 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Blo18g00105 1107 MobiDBLite consensus disorder prediction 974 1026 - -
Blo18g00105 1107 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 239 1036 - -
Blo18g00105 1107 MobiDBLite consensus disorder prediction 986 1023 - -
Blo18g00105 1107 Gene3D - 13 83 IPR036879 GO:0003677|GO:0046983
Blo18g00105 1107 Coils Coil 1098 1107 - -
Blo18g00105 1107 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Blo18g00105 1107 Pfam Ulp1 protease family, C-terminal catalytic domain 594 798 IPR003653 GO:0006508|GO:0008234
Blo18g00105 1107 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Blo18g00105 1107 SUPERFAMILY Cysteine proteinases 578 817 IPR038765 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01130 Blo-Chr4:18394377 Blo18g00105 Blo-Chr18:971128 1.54E-73 dispersed
Blo18g00105 Blo-Chr18:971128 Blo10g00112 Blo-Chr10:1208636 3.52E-30 dispersed
Blo11g00911 Blo-Chr11:18832141 Blo18g00105 Blo-Chr18:971128 8.49E-27 transposed
Blo11g00002 Blo-Chr11:10151 Blo18g00105 Blo-Chr18:971128 8.46E-33 wgd
Blo17g00098 Blo-Chr17:774926 Blo18g00105 Blo-Chr18:971128 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13564 PF02902 Peptidase_C48 3.20E-37 CL0125 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00105 K08596 - pvy:116106358 739.184