Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00114 ATGGCCCCCGGATATGATTCTGGGTTCTCTAGCCTTTTATGTTCGGAAGAGCACGCCATTTTCGAGAATAACGAGTATGGAAGTGCGATTGAGGAGGCTGACTGGTGTCATCCGAATCCAAACCAGAGCTCTAAAGGAGAAATTCCGCCATTACCGAGCGGCGAGTTTTTAAGCATAATGTTCGAGCAAGAACACCACCACATACCCAGGATTGATTATTTAAAGAGGTTACGAAGTTTTGATTCAGAGCTCATGACTAGAAAAGAAGCTTCAGATTGGATTGGAAAGGTTAGTGCTTATTTTAGATTTGGACCTCTCTGTACATACCTGGCCATAAACTACTTGGATCGATTCCTTTCCAGTTACGAATTACCTAAAGGAAAAGCTTGGACAGTGCAGTTGCTTGCTGTGGCATGTTTATCTCTGGCAGCCAAATTGGAGGAAATTCAAGTTCCAGTTTGTGTCGATTTGCAGGTTCAGCTAGCCGGAGCCGGATTTGTTTTTGAGTCAAGAACCATTCGGAGAATGGAGATTCTGGTTTTGAGCATATTAAAGTGGAGAATCCAATCTATTACTCCATTTTCGTTCATAGACTATTATCTTCACATGATTCTTGATGATCAGCTTTTGCTTGCAACTTCAATTGTACGATCCATACAGCTTTTCTCAAGCACCATAAAAGGGATTGATTTCTTGGAATTCAGACCATCAGAGATTGCAGCGGCAGTGGCTATATCTGTTGCTGGGGAGACCCAAACAGTTGATACTGAAAAAGCGATTTCTCTGCTCACTCAGGATACCCAGAAGAAGGAAAGAGTTGCAAAGTGCATTGAATTGATCGAGAGAATGTCGTTAGTTTCAAATGGTTCAGTTCTTGATCCTCAGAGTCCAAATGGGGTGTTGGAAATCGACCGTTTGAGCGAGAAAAGTGAAGAAACAGGAGGTGGGTGGTGGGAGAGCTCTACGGATAGGGGAAGCCCAGACGCCATTGCCAAGAGGAGGAGGCTGAACAGAGCCTGTGATACGAAGCTGTGA 1035 43.96 MAPGYDSGFSSLLCSEEHAIFENNEYGSAIEEADWCHPNPNQSSKGEIPPLPSGEFLSIMFEQEHHHIPRIDYLKRLRSFDSELMTRKEASDWIGKVSAYFRFGPLCTYLAINYLDRFLSSYELPKGKAWTVQLLAVACLSLAAKLEEIQVPVCVDLQVQLAGAGFVFESRTIRRMEILVLSILKWRIQSITPFSFIDYYLHMILDDQLLLATSIVRSIQLFSSTIKGIDFLEFRPSEIAAAVAISVAGETQTVDTEKAISLLTQDTQKKERVAKCIELIERMSLVSNGSVLDPQSPNGVLEIDRLSEKSEETGGGWWESSTDRGSPDAIAKRRRLNRACDTKL 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1071495 1073063 - BLOR08602 Blo18g00114 73418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00114 344 MobiDBLite consensus disorder prediction 312 331 - -
Blo18g00114 344 SMART Cyclin_C_2 191 309 IPR004367 -
Blo18g00114 344 PANTHER CYCLINS 1 322 IPR039361 -
Blo18g00114 344 SMART cyclin_7 92 182 IPR013763 -
Blo18g00114 344 Gene3D - 58 278 - -
Blo18g00114 344 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 322 - -
Blo18g00114 344 SUPERFAMILY Cyclin-like 54 188 IPR036915 -
Blo18g00114 344 Pfam Cyclin, C-terminal domain 191 285 IPR004367 -
Blo18g00114 344 CDD CYCLIN 86 181 IPR013763 -
Blo18g00114 344 Pfam Cyclin, N-terminal domain 57 188 IPR006671 -
Blo18g00114 344 Gene3D - 70 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00102 Blo-Chr17:913786 Blo18g00114 Blo-Chr18:1071495 2.12E-168 dispersed
Blo18g00114 Blo-Chr18:1071495 Blo04g01267 Blo-Chr4:26093449 4.58E-45 dispersed
Blo11g00015 Blo-Chr11:137462 Blo18g00114 Blo-Chr18:1071495 2.51E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00114 K18810 - tcc:18591783 352.058