Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00130 ATGGTGATGCTTGGGGAGTGTCTTGGGGGAAGAACACTTACTTCTTTTTATGAACCACCACCATTGTCTGTATCTTATCACAATGGAGTTTTACTGGAAGGAATCCTTCCAGTTTCTATTCTCTGGTATGGATATTTCATTTCTCCTCAGAAATCCGCCATTGCTGACTTCCTTCTCTCTCTGAACCCTCAAAACCAGGAGCTGGTCATCGGCGGTCTGTCTCCCAAACCGCCCACTGTCTCGCAATGGTGGAGCATAGTTCGAACGTATATGAAACTAGCAGGAAAAATGCAAACCCAGATAATTTTAACGAAACAATATTCTGACGTTAACTGCTCTATCGGAAAAAGCTTAACAAGGTCTCAGATTCAAGAACTAGGGCAGAAGGTCACCAGGAAACGTCCAGGTGGGCTAGCCCTGATTCTCACGGCTGAAGACGTCGCTGTCGAAGGCTTCTGCATGAGCCACTGCGGGCTCCATGGGTCGGACCCTAGGCTCAGTTCGGTCTACGTCTGGGTGGGCAACTCGGCCACCCAATGCCCTGGCCAATGCGCCTGGCCATTCCACCAGCCCATCTACGGACCTCAGACCGCCCCACTCGGCGCACCCAACGGCGACGTGGGCGTGGACGGGATGATAATAAACATAGCCACCCTCTTAGCCGGAGCAGCAACAAACCCGTATGGAAATGGCTATTTCCTCGGCCCACCGGAGGCTCCTCAAGAAGTGGCTTCAGTTTGCTCTGGAGTTTTCGGCAGCGGAGCTTATCCTGGTTACACCGGCGAGCTGCTTGTGGATCATAGCACCGGTGCAAGCTACAACGCCGTCGGTTTGAATGACAGAAAGTATCTCTTGCCAGCCTTGTTCGACCCTTCTACTTCACGCTGTTCAACTCTTGTCTGA 903 51.83 MVMLGECLGGRTLTSFYEPPPLSVSYHNGVLLEGILPVSILWYGYFISPQKSAIADFLLSLNPQNQELVIGGLSPKPPTVSQWWSIVRTYMKLAGKMQTQIILTKQYSDVNCSIGKSLTRSQIQELGQKVTRKRPGGLALILTAEDVAVEGFCMSHCGLHGSDPRLSSVYVWVGNSATQCPGQCAWPFHQPIYGPQTAPLGAPNGDVGVDGMIINIATLLAGAATNPYGNGYFLGPPEAPQEVASVCSGVFGSGAYPGYTGELLVDHSTGASYNAVGLNDRKYLLPALFDPSTSRCSTLV 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1204675 1205577 + BLOR08618 Blo18g00130 73434

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00130 300 PANTHER OS02G0756800 PROTEIN 9 300 - -
Blo18g00130 300 Pfam Phosphate-induced protein 1 conserved region 25 299 IPR006766 -
Blo18g00130 300 PANTHER PROTEIN EXORDIUM-LIKE 5 9 300 IPR006766 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00130 - - - qsu:112022580 421.009
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00421 Blo-Chr15:6014155 Blo18g00130 Blo-Chr18:1204675 2.90E-48 dispersed
Blo17g00116 Blo-Chr17:1060918 Blo18g00130 Blo-Chr18:1204675 1.30E-102 dispersed
Blo18g00130 Blo-Chr18:1204675 Blo11g00820 Blo-Chr11:13537729 4.08E-51 dispersed
Blo11g00029 Blo-Chr11:244265 Blo18g00130 Blo-Chr18:1204675 7.09E-105 wgd
Blo17g00115 Blo-Chr17:1056636 Blo18g00130 Blo-Chr18:1204675 6.81E-99 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g432 . . . . . . . Bma01g02608 . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1328 Cone7ag1269 . . Lsi04g02243 . . Cme03g01857 . Blo18g00130 . Bda13g01397 . . . Bma02g00137 . . . Cma12g00164 . . . . Cpe02g00368 Bhi09g02446 Tan01g3798 Cmetu04g0771 . Hepe01g2135 Mch11g0673 . . . . . . . . . . Chy03g01359 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 0 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00130 Blo_Chr18 FPKM 4.524304 4.720227 28.424376 29.017324 63.386337 67.812767 69.022194 19.510727 16.539049 16.985884