Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00139 ATGGATATGGACACTAATTTCACTGCCGGTGAGCCGCCGGCGACGGCCGGTGTCATGGAGTTGGAGCAGATGCCGGACACCCCGCATCGGGGATATCACCACCGTCGGGCACTCTCCGACACCTCTTTCCGATTACCGAATCTGGACGATCTTCTTGTCTTTGATCCCGATCTTGACCTTTCTTATCTTCCATCGCCTTCACCGTCTCCTTCATCTGGCGCTTCCATCTCTAAGTTCAATGATTCCAGCGGCCCCAAGCTCTTGGCCTCTGGCTCCGGCGCCGTTGGTGCTCACTTTAGAAGCTTGTCGATGGACTCCGATTTCTTCGATACCCTAGGAATTTCTGGCGATGGAGGCGATGGCGATAGGTTTGGGGGGAATTTGGAAGTGGGGGAGAAGAGGATGGTTCGTCACCGGCACAGCAATTCGATGGATGGGTCATCATCGTCGGCGTTTGAGGCTGATTGCATGATGGTTGACGGCGTGAAGAAGGCGATGGGGCCAGACAAACTCGCTGAGCTTGCCCTAATTGACCCCAAGAGAGCTAAAAGGATTCTTGCAAATCGACAATCTGCTGCCCGATCGAAGGAAAGGAAAGTTCGTTACACCAATGAGTTAGAGAGGAAGGTTCAAACGCTGCAGTCAGAAGCAACGACTCTTTCTGCTCAAGTCACAATTTTGCAGGATGGTTTCTTAATTAAAGACACCACTGGGTTGTCTACCGAGAATAAGGAACTGAAACTGAGATTACAAGCTTTGGAGCAGCAAGCCCAACTTAGGGACGCTTTGAATGAAGCGTTGAGAGAAGAAGTGCAACGGCTAAAGATAGCTGAAGGGCAAATGCCGGCCGGAAATGGCAACTCGTATAACCGGGGACTGTTTCAGCAATTCCCATCTCCTCCGCCATCTCTGCATCAATTTGGCACCTCAAAGCCTCAAATTCACATGCCTCACACCTCGGCAAACCAACAAAATCTCAATCTTGGCCTCAACGGCCACCGATCTCATCCGGGTTTCATGGACTTCCATCCTAATGCCAACTGA 1044 51.25 MDMDTNFTAGEPPATAGVMELEQMPDTPHRGYHHRRALSDTSFRLPNLDDLLVFDPDLDLSYLPSPSPSPSSGASISKFNDSSGPKLLASGSGAVGAHFRSLSMDSDFFDTLGISGDGGDGDRFGGNLEVGEKRMVRHRHSNSMDGSSSSAFEADCMMVDGVKKAMGPDKLAELALIDPKRAKRILANRQSAARSKERKVRYTNELERKVQTLQSEATTLSAQVTILQDGFLIKDTTGLSTENKELKLRLQALEQQAQLRDALNEALREEVQRLKIAEGQMPAGNGNSYNRGLFQQFPSPPPSLHQFGTSKPQIHMPHTSANQQNLNLGLNGHRSHPGFMDFHPNAN 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1291580 1293977 - BLOR08627 Blo18g00139 73443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00139 347 SUPERFAMILY Leucine zipper domain 180 230 IPR046347 GO:0003700|GO:0006355
Blo18g00139 347 Pfam bZIP transcription factor 180 227 IPR004827 GO:0003700|GO:0006355
Blo18g00139 347 Gene3D - 179 235 - -
Blo18g00139 347 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 13 340 - -
Blo18g00139 347 SMART brlzneu 176 252 IPR004827 GO:0003700|GO:0006355
Blo18g00139 347 Coils Coil 236 280 - -
Blo18g00139 347 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 13 340 - -
Blo18g00139 347 Coils Coil 203 223 - -
Blo18g00139 347 CDD bZIP_plant_RF2 181 228 IPR044759 GO:0003700|GO:0006355
Blo18g00139 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 229 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00126 Blo18g00139 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g01015 Blo-Chr13:32501722 Blo18g00139 Blo-Chr18:1291580 2.73E-56 dispersed
Blo14g00054 Blo-Chr14:325091 Blo18g00139 Blo-Chr18:1291580 6.05E-55 dispersed
Blo17g00749 Blo-Chr17:23503188 Blo18g00139 Blo-Chr18:1291580 5.11E-44 dispersed
Blo12g00626 Blo-Chr12:24519458 Blo18g00139 Blo-Chr18:1291580 5.36E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13568 PF00170 bZIP_1 1.20E-09 CL0018 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00139 K20557 - jre:109011427 329.331