Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00153 ATGGCAGAGGAAAACAAAGTGGTATTGTATGGAATGTGGGCTAGTCCTTTTGTGAAGAGGGTGGAAATTGCACTGAAAATCAAAGGGATCGCCTTTGAGTATGTGGAAGAGGATTTTAGCAACAAAAGCCCGTCGCTTCTCCAATACAACCCTGTTTATAAGAAAGTTCCTGTTTTCGTTCACAACGGAAAACCCATTGCTGAATCGGTTGTAATTCTCGAATACGTCGATGAAACTTGGAAGAACCGTCCTTCGCTATTGCCTCAAGATCCCTACAAAAGAGCTCAAATCCGATTCTGGGTTTCCTTTCTGGAGAAACAGGTGTTCGATAGAATGACGATAACAGTAAAAACAGAAGGAGAAGAACAGGCGGAAGCTGTAAAGGAAGCAATGGCGCTGTTTAAGATTTTCGAAGGTGGGTTGAAGGAATTGCTTGCAGACAACACTCCATTTGTAAATGGAAACGAATTAGGGATCTTGGAGCTTGTAATGGTGTCTCTGTTTGGGCCTTACAAGGCTCAAGAACAAGCCCTTGGATTCAAGGTGATTGACCAAGAAAAAATTCCAGTCATCTTCTGTTGGTTGAATGCCATAATGGAACACCCAATTGTGAAAGAAGCTTCTCTTCCTCATGAAAAAGTTGTGGCCTATATCCAGGCTATCAGACACAGGCTGCTGAAATCCACTGCAGCTTGA 696 42.96 MAEENKVVLYGMWASPFVKRVEIALKIKGIAFEYVEEDFSNKSPSLLQYNPVYKKVPVFVHNGKPIAESVVILEYVDETWKNRPSLLPQDPYKRAQIRFWVSFLEKQVFDRMTITVKTEGEEQAEAVKEAMALFKIFEGGLKELLADNTPFVNGNELGILELVMVSLFGPYKAQEQALGFKVIDQEKIPVIFCWLNAIMEHPIVKEASLPHEKVVAYIQAIRHRLLKSTAA 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1398717 1399570 + BLOR08641 Blo18g00153 73457

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00153 231 Gene3D - 87 229 - -
Blo18g00153 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Blo18g00153 231 PANTHER GLUTATHIONE S-TRANSFERASE 1 223 - -
Blo18g00153 231 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Blo18g00153 231 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Blo18g00153 231 SFLD Main.3: Omega- and Tau-like 3 228 IPR045073 -
Blo18g00153 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 223 IPR045073 -
Blo18g00153 231 SFLD Main (cytGST) 3 228 - -
Blo18g00153 231 SUPERFAMILY GST C-terminal domain-like 78 224 IPR036282 -
Blo18g00153 231 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Blo18g00153 231 CDD GST_N_Tau 7 80 - -
Blo18g00153 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Blo18g00153 231 Gene3D Glutaredoxin 1 86 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00153 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - tcc:18604669 297.745
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00772 Blo-Chr11:11094052 Blo18g00153 Blo-Chr18:1398717 8.44E-36 dispersed
Blo18g00153 Blo-Chr18:1398717 Blo10g00706 Blo-Chr10:22568544 1.00E-46 dispersed
Blo18g00153 Blo-Chr18:1398717 Blo16g00186 Blo-Chr16:4216258 1.06E-69 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1356 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo18g00153 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001282 1 2 2 3 1 3 0 4 4 3 1 4 2 5 2 1 4 1 1 2 3 3 1 6 4 1 2 3 2 4 75
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00153 Blo_Chr18 FPKM 0.793703 1.137768 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0