Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00166 ATGCAGAGGGTTGGTGTGGTTGTCGTTGTGGTGGCTATGTCAATTTTAGGATTGACTTCACCTTCTTCTTCTTCGTCTTTAGATGGGGAACAAATTTTCAAGGTGGACGGGACGGTCTTGGAGCTTGACGATTCCAATTTCGATTCCGCCATTTCATCTTTTGATTTCGTCTTGGTTGACTTCTATGCTCCCTGGTGTGGCCACTGCAAGCGTCTTTCTCCCCAGTTAGATGCTGCTGCTCCTTTGCTTGCTGGCTTGAAGGAACCTATAGTGATAGCAAAAGTAAACGCCGAAAAATTTACCGGTCTTGCTAAAAAATATGATGTTGATGCATACCCTACATTGAAAATCTTTATGCATGGCATCCCTAGCGACTATCGTGGACCAAGGAAAGCAGATTTACTTGTGAGATACCTAAAGAAATTTGTTGCTCCTGATGTCATTAGTCTTGATTCAGACACAGCTATCAAGGACTTTGTAGAAGCATCTGGCACTTTTTTCCCTATCAATATCGGCTTTGGCTTGAGTGAGTCAGTTATCTCAAAATTAGCTGTGAAGTACAAGAAGAAGGCATGGTTTTCTGTGGCTAAGGATTTCTCGGAGAATGTAATGGTGTCCTATGATTTTGACAAAGTTCCTGCATTAGTATCTATCAATCCTGCCTATGACAATGAGAAAAACATTTTTTATGGCCCCTTTGAAGATCAATTCTTGGAAGAGTTTATTAAACAAAGTCTTCTCCCTCTTGTCGTACCAATAAATTATGACACACTAAAGCTATTGAAAGAAGAAGAGAGGAAAATCGTACTCGCACTTGTGAAGGATGAGGCTGATGATAAGACCAAAAATCTGATTAAGTTACTAAAGGCGGGTGCATCTGCCAATCGTGACTTGATATTTGGATATGTTGGCATTAAGCAGTGGGAAGAGTTTGCTGAAACATTCGGGGCTAATAGGAAGACGGCACAACCAAAACTGGTTGTTTGGGATGGAAACGAAGAATACTTATCAGTTATTGGGTCAGAAAACATTTCAGAGGACAACCAGGCAACCCAAGTTTCGGAGTTCCTCGAAGGATACAGAGAAGGAAGAACTCTACAGCATAGATTGGCTGGTCCATCATTTTTTGGTTACATCAACTCCCTCATTGGCATCAGGACAGTGTATATAATCGTCTTTCTAGTTGGAATTTTGATGGTCATTAGGACCATCAACGGCGACAGTGATGATGAGCCGCTTCAGGTCGGGGCAGAGCCTGTTGATCGAGCTGGTGGTTCTCTTTCTGAGGTTAGAAACAATGACCATAGAAGTGGAGAGAAGGAAGATTAG 1329 42.06 MQRVGVVVVVVAMSILGLTSPSSSSSLDGEQIFKVDGTVLELDDSNFDSAISSFDFVLVDFYAPWCGHCKRLSPQLDAAAPLLAGLKEPIVIAKVNAEKFTGLAKKYDVDAYPTLKIFMHGIPSDYRGPRKADLLVRYLKKFVAPDVISLDSDTAIKDFVEASGTFFPINIGFGLSESVISKLAVKYKKKAWFSVAKDFSENVMVSYDFDKVPALVSINPAYDNEKNIFYGPFEDQFLEEFIKQSLLPLVVPINYDTLKLLKEEERKIVLALVKDEADDKTKNLIKLLKAGASANRDLIFGYVGIKQWEEFAETFGANRKTAQPKLVVWDGNEEYLSVIGSENISEDNQATQVSEFLEGYREGRTLQHRLAGPSFFGYINSLIGIRTVYIIVFLVGILMVIRTINGDSDDEPLQVGAEPVDRAGGSLSEVRNNDHRSGEKED 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1561359 1565751 - BLOR08654 Blo18g00166 73470

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00166 442 PANTHER PROTEIN DISULFIDE ISOMERASE 11 442 - -
Blo18g00166 442 CDD PDI_a_family 40 139 - -
Blo18g00166 442 Pfam Thioredoxin 39 141 IPR013766 -
Blo18g00166 442 ProSitePatterns Thioredoxin family active site. 58 76 IPR017937 -
Blo18g00166 442 Gene3D Glutaredoxin 22 153 - -
Blo18g00166 442 PRINTS Thioredoxin family signature 108 119 - -
Blo18g00166 442 PRINTS Thioredoxin family signature 57 65 - -
Blo18g00166 442 PRINTS Thioredoxin family signature 65 74 - -
Blo18g00166 442 MobiDBLite consensus disorder prediction 410 442 - -
Blo18g00166 442 Pfam Thioredoxin-like domain 183 346 - -
Blo18g00166 442 Gene3D Glutaredoxin 235 371 - -
Blo18g00166 442 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-2 11 442 - -
Blo18g00166 442 ProSiteProfiles Thioredoxin domain profile. 13 144 IPR013766 -
Blo18g00166 442 MobiDBLite consensus disorder prediction 428 442 - -
Blo18g00166 442 SUPERFAMILY Thioredoxin-like 32 142 IPR036249 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00166 K09580 PDIA1, P4HB; protein disulfide-isomerase A1 [EC:5.3.4.1] - zju:107420522 618.231
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo17g00155 Blo18g00166 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00175 Blo-Chr17:1771070 Blo18g00166 Blo-Chr18:1561359 1.36E-10 dispersed
Blo18g00166 Blo-Chr18:1561359 Blo03g01093 Blo-Chr3:37378135 1.51E-06 dispersed
Blo17g00155 Blo-Chr17:1451870 Blo18g00166 Blo-Chr18:1561359 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1440 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1206 . . . . . . . Blo17g00155 Blo18g00166 . Bda13g01447 . Bpe14g00408 . Bma02g00190 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006012 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo18g00166 Blo_Chr18 FPKM 3.059268 3.284203 6.107197 6.648851 0.990734 0.522044 1.041746 1.089896 1.292874 0.99167