Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo18g00177 | ATGTCGACCCAGAATCGCCGATCCTCGCTTTCGTCCTCTACGTCGTCTTCATTGGCGAAGAGGCAAGCGTCGTCGGAGAATATGAGGAAGGCTGTGGCGGTTCCGACTCATCTCGCAAAGAAGCGGGCGCCTCTCGGAAACATCACCAATTTGAAGGGTTCTCCTCACAGTGCGTCGCGAAGCTCTGTCCCTTCTTCTACCATGGCACCGTATAAAACAAAAATTTCCAAGGGTAAGAAATGTTCCCCTGCAAGAAATGCCAGCCCAACCTTAACAGGGAGTCAGCTGCCTGCAATGGTTAATGTTAAATCTACTTCAACATTTCCTCTCAAACCTACAGCTTTCCCAAAATGTGAATTGATCATCCCTCCCTTGGCTGTAATCCCACCTCCTAGCAGCATGGATGTTTCTCCAAGTAAATCAGATGGAATTTCAGTTTCTTTTGATGAGACAATGTCTACTTCTGATTCCTTTAAGAGTCCTGAAGTTGAGTATTTAGACAACAATGATGTACCCACTGCTGATACAATCGAGAGGAAAGCATTAAGCAATCTCTATATTTCAGACCATCATGTAGACACAACTGATGGGAATCCTTGCCATGGAGATATGCTTTTTGACCTTCAGAGAGACGAGAAATTTGTGGATATTGATAATAACTACGAAGATCCACAGATGTGTGCTACCATTGCTTGTGATATTTACAAGCATTTGCGCGCATCGGAGGCAAAGAAAAGGCCTTCCCCTGATTTCATGGAGACGATTCAGAAGGATATAAGTGCTAACATGCGTGCCATTTTAATCAATTGGCTTGTGGAGGTATCAGAAGAATACAGACTAGTCCCCGATACACTCTATTTGACTGTAAATTACATTGATCGATATCTCTGTGGAAATGCAATGAACAGACAAAGATTACAGCTGCTTGGGGTTGCCTCCATGATGATTGCTTCGAAGTATGAGGAGATCTGTGCGCCACAGGTGGAAGAATTTTGTTATATTACAGACAATACATATTTTAAGGAAGAGGTATTGCAAATGGAATCATCTATTTTGAACTACTTGAAATTTGAAATGACTGCACCAACAGCCAAGTGTTTTCTAAGGCGATTTGTTCGGGTTGCTCAAGGAATAGACGAGGTTCCATCAATGCAGATAGAATGCTTAGCTAACTACCTTGCCGAGCTGTCTCTTATCGAATACAGCATGCTCGTTTATTCTCCATCACTCATTGCCGCTTCAGCCATTTTCTTGGCCAAGTTCATACTTTTCCCGACGAAGAGACCGTGGAACTCCACATTGCAGCATTACACTCTTTACCAGCCTTGTGATCTGAGAGACTGTGTAAAGAACTTGCATAGACTCTGCTGTACTACTCCAACTTCTGGTCTCCCAGCCATTAGAGAGAAATATAGCCAACACAAGTACAAACAGGTGGCGAAAAAACACTGTCCTCCAGCATTACCTTCTGAGTTTTTCTTCAATGAAATCCAATAG | 1497 | 43.15 | MSTQNRRSSLSSSTSSSLAKRQASSENMRKAVAVPTHLAKKRAPLGNITNLKGSPHSASRSSVPSSTMAPYKTKISKGKKCSPARNASPTLTGSQLPAMVNVKSTSTFPLKPTAFPKCELIIPPLAVIPPPSSMDVSPSKSDGISVSFDETMSTSDSFKSPEVEYLDNNDVPTADTIERKALSNLYISDHHVDTTDGNPCHGDMLFDLQRDEKFVDIDNNYEDPQMCATIACDIYKHLRASEAKKRPSPDFMETIQKDISANMRAILINWLVEVSEEYRLVPDTLYLTVNYIDRYLCGNAMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSILNYLKFEMTAPTAKCFLRRFVRVAQGIDEVPSMQIECLANYLAELSLIEYSMLVYSPSLIAASAIFLAKFILFPTKRPWNSTLQHYTLYQPCDLRDCVKNLHRLCCTTPTSGLPAIREKYSQHKYKQVAKKHCPPALPSEFFFNEIQ | 498 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 1706331 | 1709443 | - | BLOR08665 | Blo18g00177 | 73481 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo18g00177 | 498 | SMART | Cyclin_C_2 | 362 | 485 | IPR004367 | - | |
Blo18g00177 | 498 | Gene3D | - | 233 | 481 | - | - | |
Blo18g00177 | 498 | SMART | cyclin_7 | 269 | 353 | IPR013763 | - | |
Blo18g00177 | 498 | SMART | cyclin_7 | 366 | 454 | IPR013763 | - | |
Blo18g00177 | 498 | Pfam | Cyclin, C-terminal domain | 362 | 483 | IPR004367 | - | |
Blo18g00177 | 498 | PANTHER | CYCLINS | 30 | 494 | IPR039361 | - | |
Blo18g00177 | 498 | MobiDBLite | consensus disorder prediction | 50 | 72 | - | - | |
Blo18g00177 | 498 | CDD | CYCLIN | 263 | 352 | IPR013763 | - | |
Blo18g00177 | 498 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
Blo18g00177 | 498 | ProSitePatterns | Cyclins signature. | 264 | 295 | IPR006671 | - | |
Blo18g00177 | 498 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Blo18g00177 | 498 | Gene3D | - | 247 | 360 | - | - | |
Blo18g00177 | 498 | Pfam | Cyclin, N-terminal domain | 233 | 359 | IPR006671 | - | |
Blo18g00177 | 498 | PANTHER | CYCLIN-A1-1 | 30 | 494 | - | - | |
Blo18g00177 | 498 | SUPERFAMILY | Cyclin-like | 222 | 359 | IPR036915 | - | |
Blo18g00177 | 498 | CDD | CYCLIN | 360 | 453 | IPR013763 | - | |
Blo18g00177 | 498 | PIRSF | Cyclin_A_B_D_E | 1 | 492 | IPR039361 | - | |
Blo18g00177 | 498 | SUPERFAMILY | Cyclin-like | 362 | 486 | IPR036915 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo01g01510 | Blo18g00177 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo05g00857 | Blo-Chr5:31001401 | Blo18g00177 | Blo-Chr18:1706331 | 0 | dispersed | |
Blo18g00177 | Blo-Chr18:1706331 | Blo01g01635 | Blo-Chr1:56180721 | 1.63E-52 | dispersed | |
Blo18g00177 | Blo-Chr18:1706331 | Blo12g01089 | Blo-Chr12:28551756 | 3.09E-103 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo18g00177 | K06627 | - | qsu:112028095 | 687.567 |