Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00177 ATGTCGACCCAGAATCGCCGATCCTCGCTTTCGTCCTCTACGTCGTCTTCATTGGCGAAGAGGCAAGCGTCGTCGGAGAATATGAGGAAGGCTGTGGCGGTTCCGACTCATCTCGCAAAGAAGCGGGCGCCTCTCGGAAACATCACCAATTTGAAGGGTTCTCCTCACAGTGCGTCGCGAAGCTCTGTCCCTTCTTCTACCATGGCACCGTATAAAACAAAAATTTCCAAGGGTAAGAAATGTTCCCCTGCAAGAAATGCCAGCCCAACCTTAACAGGGAGTCAGCTGCCTGCAATGGTTAATGTTAAATCTACTTCAACATTTCCTCTCAAACCTACAGCTTTCCCAAAATGTGAATTGATCATCCCTCCCTTGGCTGTAATCCCACCTCCTAGCAGCATGGATGTTTCTCCAAGTAAATCAGATGGAATTTCAGTTTCTTTTGATGAGACAATGTCTACTTCTGATTCCTTTAAGAGTCCTGAAGTTGAGTATTTAGACAACAATGATGTACCCACTGCTGATACAATCGAGAGGAAAGCATTAAGCAATCTCTATATTTCAGACCATCATGTAGACACAACTGATGGGAATCCTTGCCATGGAGATATGCTTTTTGACCTTCAGAGAGACGAGAAATTTGTGGATATTGATAATAACTACGAAGATCCACAGATGTGTGCTACCATTGCTTGTGATATTTACAAGCATTTGCGCGCATCGGAGGCAAAGAAAAGGCCTTCCCCTGATTTCATGGAGACGATTCAGAAGGATATAAGTGCTAACATGCGTGCCATTTTAATCAATTGGCTTGTGGAGGTATCAGAAGAATACAGACTAGTCCCCGATACACTCTATTTGACTGTAAATTACATTGATCGATATCTCTGTGGAAATGCAATGAACAGACAAAGATTACAGCTGCTTGGGGTTGCCTCCATGATGATTGCTTCGAAGTATGAGGAGATCTGTGCGCCACAGGTGGAAGAATTTTGTTATATTACAGACAATACATATTTTAAGGAAGAGGTATTGCAAATGGAATCATCTATTTTGAACTACTTGAAATTTGAAATGACTGCACCAACAGCCAAGTGTTTTCTAAGGCGATTTGTTCGGGTTGCTCAAGGAATAGACGAGGTTCCATCAATGCAGATAGAATGCTTAGCTAACTACCTTGCCGAGCTGTCTCTTATCGAATACAGCATGCTCGTTTATTCTCCATCACTCATTGCCGCTTCAGCCATTTTCTTGGCCAAGTTCATACTTTTCCCGACGAAGAGACCGTGGAACTCCACATTGCAGCATTACACTCTTTACCAGCCTTGTGATCTGAGAGACTGTGTAAAGAACTTGCATAGACTCTGCTGTACTACTCCAACTTCTGGTCTCCCAGCCATTAGAGAGAAATATAGCCAACACAAGTACAAACAGGTGGCGAAAAAACACTGTCCTCCAGCATTACCTTCTGAGTTTTTCTTCAATGAAATCCAATAG 1497 43.15 MSTQNRRSSLSSSTSSSLAKRQASSENMRKAVAVPTHLAKKRAPLGNITNLKGSPHSASRSSVPSSTMAPYKTKISKGKKCSPARNASPTLTGSQLPAMVNVKSTSTFPLKPTAFPKCELIIPPLAVIPPPSSMDVSPSKSDGISVSFDETMSTSDSFKSPEVEYLDNNDVPTADTIERKALSNLYISDHHVDTTDGNPCHGDMLFDLQRDEKFVDIDNNYEDPQMCATIACDIYKHLRASEAKKRPSPDFMETIQKDISANMRAILINWLVEVSEEYRLVPDTLYLTVNYIDRYLCGNAMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSILNYLKFEMTAPTAKCFLRRFVRVAQGIDEVPSMQIECLANYLAELSLIEYSMLVYSPSLIAASAIFLAKFILFPTKRPWNSTLQHYTLYQPCDLRDCVKNLHRLCCTTPTSGLPAIREKYSQHKYKQVAKKHCPPALPSEFFFNEIQ 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1706331 1709443 - BLOR08665 Blo18g00177 73481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00177 498 SMART Cyclin_C_2 362 485 IPR004367 -
Blo18g00177 498 Gene3D - 233 481 - -
Blo18g00177 498 SMART cyclin_7 269 353 IPR013763 -
Blo18g00177 498 SMART cyclin_7 366 454 IPR013763 -
Blo18g00177 498 Pfam Cyclin, C-terminal domain 362 483 IPR004367 -
Blo18g00177 498 PANTHER CYCLINS 30 494 IPR039361 -
Blo18g00177 498 MobiDBLite consensus disorder prediction 50 72 - -
Blo18g00177 498 CDD CYCLIN 263 352 IPR013763 -
Blo18g00177 498 MobiDBLite consensus disorder prediction 1 92 - -
Blo18g00177 498 ProSitePatterns Cyclins signature. 264 295 IPR006671 -
Blo18g00177 498 MobiDBLite consensus disorder prediction 1 24 - -
Blo18g00177 498 Gene3D - 247 360 - -
Blo18g00177 498 Pfam Cyclin, N-terminal domain 233 359 IPR006671 -
Blo18g00177 498 PANTHER CYCLIN-A1-1 30 494 - -
Blo18g00177 498 SUPERFAMILY Cyclin-like 222 359 IPR036915 -
Blo18g00177 498 CDD CYCLIN 360 453 IPR013763 -
Blo18g00177 498 PIRSF Cyclin_A_B_D_E 1 492 IPR039361 -
Blo18g00177 498 SUPERFAMILY Cyclin-like 362 486 IPR036915 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01510 Blo18g00177 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00857 Blo-Chr5:31001401 Blo18g00177 Blo-Chr18:1706331 0 dispersed
Blo18g00177 Blo-Chr18:1706331 Blo01g01635 Blo-Chr1:56180721 1.63E-52 dispersed
Blo18g00177 Blo-Chr18:1706331 Blo12g01089 Blo-Chr12:28551756 3.09E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00177 K06627 - qsu:112028095 687.567